Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4IP1Q8WWV3 AC009831.1-201ENST00000580420 1582 ntBASIC19.45■□□□□ 0.7
RTN4IP1Q8WWV3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4IP1Q8WWV3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4IP1Q8WWV3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.45■□□□□ 0.7
RTN4IP1Q8WWV3 AC133552.2-201ENST00000619106 1032 ntBASIC19.45■□□□□ 0.7
RTN4IP1Q8WWV3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.45■□□□□ 0.7
RTN4IP1Q8WWV3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.45■□□□□ 0.7
RTN4IP1Q8WWV3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN4IP1Q8WWV3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4IP1Q8WWV3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4IP1Q8WWV3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.44■□□□□ 0.7
RTN4IP1Q8WWV3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN4IP1Q8WWV3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN4IP1Q8WWV3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RTN4IP1Q8WWV3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RTN4IP1Q8WWV3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.43■□□□□ 0.7
RTN4IP1Q8WWV3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN4IP1Q8WWV3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.42■□□□□ 0.7
RTN4IP1Q8WWV3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.42■□□□□ 0.7
RTN4IP1Q8WWV3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.42■□□□□ 0.7
RTN4IP1Q8WWV3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.42■□□□□ 0.7
RTN4IP1Q8WWV3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4IP1Q8WWV3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4IP1Q8WWV3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4IP1Q8WWV3 ABCB10P4-201ENST00000566803 2184 ntBASIC19.42■□□□□ 0.7
RTN4IP1Q8WWV3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.41■□□□□ 0.7
RTN4IP1Q8WWV3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4IP1Q8WWV3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RTN4IP1Q8WWV3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4IP1Q8WWV3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RTN4IP1Q8WWV3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4IP1Q8WWV3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4IP1Q8WWV3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4IP1Q8WWV3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4IP1Q8WWV3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.4■□□□□ 0.7
RTN4IP1Q8WWV3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RTN4IP1Q8WWV3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4IP1Q8WWV3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4IP1Q8WWV3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4IP1Q8WWV3 AC079834.2-201ENST00000609776 1949 ntBASIC19.4■□□□□ 0.7
RTN4IP1Q8WWV3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4IP1Q8WWV3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4IP1Q8WWV3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RTN4IP1Q8WWV3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.4■□□□□ 0.7
RTN4IP1Q8WWV3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.7
RTN4IP1Q8WWV3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4IP1Q8WWV3 MIR6089-201ENST00000616698 64 ntBASIC19.39■□□□□ 0.69
RTN4IP1Q8WWV3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4IP1Q8WWV3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.39■□□□□ 0.69
RTN4IP1Q8WWV3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4IP1Q8WWV3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4IP1Q8WWV3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RTN4IP1Q8WWV3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4IP1Q8WWV3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4IP1Q8WWV3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4IP1Q8WWV3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.38■□□□□ 0.69
RTN4IP1Q8WWV3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4IP1Q8WWV3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTN4IP1Q8WWV3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RTN4IP1Q8WWV3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.38■□□□□ 0.69
RTN4IP1Q8WWV3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
RTN4IP1Q8WWV3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4IP1Q8WWV3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4IP1Q8WWV3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4IP1Q8WWV3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4IP1Q8WWV3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RTN4IP1Q8WWV3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4IP1Q8WWV3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.37■□□□□ 0.69
RTN4IP1Q8WWV3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTN4IP1Q8WWV3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.37■□□□□ 0.69
RTN4IP1Q8WWV3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.37■□□□□ 0.69
RTN4IP1Q8WWV3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4IP1Q8WWV3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4IP1Q8WWV3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.36■□□□□ 0.69
RTN4IP1Q8WWV3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4IP1Q8WWV3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
RTN4IP1Q8WWV3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RTN4IP1Q8WWV3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RTN4IP1Q8WWV3 AL592293.1-201ENST00000502889 1188 ntBASIC19.36■□□□□ 0.69
RTN4IP1Q8WWV3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.36■□□□□ 0.69
RTN4IP1Q8WWV3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4IP1Q8WWV3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4IP1Q8WWV3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4IP1Q8WWV3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.36■□□□□ 0.69
RTN4IP1Q8WWV3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTN4IP1Q8WWV3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.36■□□□□ 0.69
RTN4IP1Q8WWV3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4IP1Q8WWV3 ABHD17AP5-201ENST00000580133 923 ntBASIC19.35■□□□□ 0.69
RTN4IP1Q8WWV3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4IP1Q8WWV3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4IP1Q8WWV3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTN4IP1Q8WWV3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN4IP1Q8WWV3 KRT18P10-201ENST00000388836 1287 ntBASIC19.34■□□□□ 0.69
RTN4IP1Q8WWV3 U85056.1-201ENST00000616429 682 ntBASIC19.34■□□□□ 0.69
RTN4IP1Q8WWV3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTN4IP1Q8WWV3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
RTN4IP1Q8WWV3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.33■□□□□ 0.68
RTN4IP1Q8WWV3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.33■□□□□ 0.68
RTN4IP1Q8WWV3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms