Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
CCHCR1Q8TD31 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CCHCR1Q8TD31 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.1■■□□□ 1.45
CCHCR1Q8TD31 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCHCR1Q8TD31 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CCHCR1Q8TD31 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCHCR1Q8TD31 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CCHCR1Q8TD31 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CCHCR1Q8TD31 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CCHCR1Q8TD31 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CCHCR1Q8TD31 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.09■■□□□ 1.45
CCHCR1Q8TD31 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.09■■□□□ 1.45
CCHCR1Q8TD31 AC012354.3-201ENST00000623734 483 ntBASIC24.09■■□□□ 1.45
CCHCR1Q8TD31 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCHCR1Q8TD31 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CCHCR1Q8TD31 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCHCR1Q8TD31 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
CCHCR1Q8TD31 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
CCHCR1Q8TD31 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCHCR1Q8TD31 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCHCR1Q8TD31 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCHCR1Q8TD31 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.08■■□□□ 1.45
CCHCR1Q8TD31 AC004812.2-201ENST00000611079 2094 ntBASIC24.07■■□□□ 1.44
CCHCR1Q8TD31 DUX4L9-201ENST00000449051 1259 ntBASIC24.07■■□□□ 1.44
CCHCR1Q8TD31 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCHCR1Q8TD31 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
CCHCR1Q8TD31 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCHCR1Q8TD31 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCHCR1Q8TD31 MIR6765-201ENST00000614092 87 ntBASIC24.06■■□□□ 1.44
CCHCR1Q8TD31 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.06■■□□□ 1.44
CCHCR1Q8TD31 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCHCR1Q8TD31 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCHCR1Q8TD31 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCHCR1Q8TD31 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCHCR1Q8TD31 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.05■■□□□ 1.44
CCHCR1Q8TD31 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCHCR1Q8TD31 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.05■■□□□ 1.44
CCHCR1Q8TD31 SPCS2P3-201ENST00000500401 656 ntBASIC24.05■■□□□ 1.44
CCHCR1Q8TD31 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCHCR1Q8TD31 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.04■■□□□ 1.44
CCHCR1Q8TD31 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCHCR1Q8TD31 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCHCR1Q8TD31 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCHCR1Q8TD31 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCHCR1Q8TD31 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCHCR1Q8TD31 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.03■■□□□ 1.44
CCHCR1Q8TD31 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.03■■□□□ 1.44
CCHCR1Q8TD31 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCHCR1Q8TD31 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCHCR1Q8TD31 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCHCR1Q8TD31 ATP5G2P3-201ENST00000429083 425 ntBASIC24.03■■□□□ 1.44
CCHCR1Q8TD31 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
CCHCR1Q8TD31 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.03■■□□□ 1.44
CCHCR1Q8TD31 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.03■■□□□ 1.44
CCHCR1Q8TD31 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CCHCR1Q8TD31 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCHCR1Q8TD31 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCHCR1Q8TD31 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CCHCR1Q8TD31 HLA-L-211ENST00000482052 1765 ntBASIC24.02■■□□□ 1.44
CCHCR1Q8TD31 TSPY13P-201ENST00000338964 914 ntBASIC24.02■■□□□ 1.44
CCHCR1Q8TD31 AC004987.1-201ENST00000428627 508 ntBASIC24.02■■□□□ 1.44
CCHCR1Q8TD31 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.02■■□□□ 1.44
CCHCR1Q8TD31 FOXO3B-201ENST00000395675 1928 ntBASIC24.02■■□□□ 1.44
CCHCR1Q8TD31 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CCHCR1Q8TD31 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.02■■□□□ 1.44
CCHCR1Q8TD31 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCHCR1Q8TD31 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCHCR1Q8TD31 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCHCR1Q8TD31 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.01■■□□□ 1.43
CCHCR1Q8TD31 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.01■■□□□ 1.43
CCHCR1Q8TD31 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCHCR1Q8TD31 CLDN5-201ENST00000403084 2357 ntBASIC24.01■■□□□ 1.43
CCHCR1Q8TD31 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCHCR1Q8TD31 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCHCR1Q8TD31 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CCHCR1Q8TD31 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CCHCR1Q8TD31 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CCHCR1Q8TD31 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCHCR1Q8TD31 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CCHCR1Q8TD31 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24■■□□□ 1.43
CCHCR1Q8TD31 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24■■□□□ 1.43
CCHCR1Q8TD31 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCHCR1Q8TD31 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCHCR1Q8TD31 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCHCR1Q8TD31 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.99■■□□□ 1.43
CCHCR1Q8TD31 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CCHCR1Q8TD31 DUX4L18-201ENST00000553347 1267 ntBASIC23.99■■□□□ 1.43
CCHCR1Q8TD31 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CCHCR1Q8TD31 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCHCR1Q8TD31 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCHCR1Q8TD31 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCHCR1Q8TD31 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
CCHCR1Q8TD31 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCHCR1Q8TD31 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCHCR1Q8TD31 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCHCR1Q8TD31 DUSP8P5-201ENST00000422884 1815 ntBASIC23.98■■□□□ 1.43
CCHCR1Q8TD31 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.98■■□□□ 1.43
CCHCR1Q8TD31 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.98■■□□□ 1.43
CCHCR1Q8TD31 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.98■■□□□ 1.43
CCHCR1Q8TD31 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms