Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
RGPD4Q7Z3J3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.17■■■□□ 2.42
RGPD4Q7Z3J3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC30.17■■■□□ 2.42
RGPD4Q7Z3J3 AC136469.2-201ENST00000623944 1028 ntBASIC30.17■■■□□ 2.42
RGPD4Q7Z3J3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC30.17■■■□□ 2.42
RGPD4Q7Z3J3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RGPD4Q7Z3J3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
RGPD4Q7Z3J3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
RGPD4Q7Z3J3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
RGPD4Q7Z3J3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
RGPD4Q7Z3J3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RGPD4Q7Z3J3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RGPD4Q7Z3J3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RGPD4Q7Z3J3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
RGPD4Q7Z3J3 AC005703.6-201ENST00000623265 1329 ntBASIC30.14■■■□□ 2.42
RGPD4Q7Z3J3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.14■■■□□ 2.42
RGPD4Q7Z3J3 AC090877.2-201ENST00000558441 1738 ntBASIC30.14■■■□□ 2.42
RGPD4Q7Z3J3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC30.14■■■□□ 2.42
RGPD4Q7Z3J3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC30.13■■■□□ 2.41
RGPD4Q7Z3J3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
RGPD4Q7Z3J3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
RGPD4Q7Z3J3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC30.13■■■□□ 2.41
RGPD4Q7Z3J3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC30.13■■■□□ 2.41
RGPD4Q7Z3J3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RGPD4Q7Z3J3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC30.13■■■□□ 2.41
RGPD4Q7Z3J3 LINC01003-201ENST00000564834 1764 ntBASIC30.12■■■□□ 2.41
RGPD4Q7Z3J3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RGPD4Q7Z3J3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RGPD4Q7Z3J3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RGPD4Q7Z3J3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RGPD4Q7Z3J3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC30.11■■■□□ 2.41
RGPD4Q7Z3J3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC30.11■■■□□ 2.41
RGPD4Q7Z3J3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC30.11■■■□□ 2.41
RGPD4Q7Z3J3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
RGPD4Q7Z3J3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
RGPD4Q7Z3J3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
RGPD4Q7Z3J3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
RGPD4Q7Z3J3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC30.1■■■□□ 2.41
RGPD4Q7Z3J3 MPST-208ENST00000628507 698 ntTSL 5 BASIC30.1■■■□□ 2.41
RGPD4Q7Z3J3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC30.1■■■□□ 2.41
RGPD4Q7Z3J3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RGPD4Q7Z3J3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC30.1■■■□□ 2.41
RGPD4Q7Z3J3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC30.1■■■□□ 2.41
RGPD4Q7Z3J3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC30.1■■■□□ 2.41
RGPD4Q7Z3J3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
RGPD4Q7Z3J3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
RGPD4Q7Z3J3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
RGPD4Q7Z3J3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC30.09■■■□□ 2.41
RGPD4Q7Z3J3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
RGPD4Q7Z3J3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
RGPD4Q7Z3J3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RGPD4Q7Z3J3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RGPD4Q7Z3J3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC30.08■■■□□ 2.41
RGPD4Q7Z3J3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC30.08■■■□□ 2.41
RGPD4Q7Z3J3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RGPD4Q7Z3J3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RGPD4Q7Z3J3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC30.08■■■□□ 2.41
RGPD4Q7Z3J3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC30.08■■■□□ 2.41
RGPD4Q7Z3J3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.08■■■□□ 2.41
RGPD4Q7Z3J3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
RGPD4Q7Z3J3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC30.08■■■□□ 2.41
RGPD4Q7Z3J3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC30.08■■■□□ 2.41
RGPD4Q7Z3J3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
RGPD4Q7Z3J3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RGPD4Q7Z3J3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC30.07■■■□□ 2.4
RGPD4Q7Z3J3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
RGPD4Q7Z3J3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RGPD4Q7Z3J3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RGPD4Q7Z3J3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC30.06■■■□□ 2.4
RGPD4Q7Z3J3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC30.06■■■□□ 2.4
RGPD4Q7Z3J3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC30.06■■■□□ 2.4
RGPD4Q7Z3J3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC30.06■■■□□ 2.4
RGPD4Q7Z3J3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
RGPD4Q7Z3J3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
RGPD4Q7Z3J3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
RGPD4Q7Z3J3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RGPD4Q7Z3J3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
RGPD4Q7Z3J3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
RGPD4Q7Z3J3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC30.05■■■□□ 2.4
RGPD4Q7Z3J3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
RGPD4Q7Z3J3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC30.05■■■□□ 2.4
RGPD4Q7Z3J3 AC099791.2-201ENST00000605725 427 ntBASIC30.05■■■□□ 2.4
RGPD4Q7Z3J3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
RGPD4Q7Z3J3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RGPD4Q7Z3J3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
RGPD4Q7Z3J3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RGPD4Q7Z3J3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RGPD4Q7Z3J3 AC004911.1-201ENST00000416316 871 ntBASIC30.04■■■□□ 2.4
RGPD4Q7Z3J3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.03■■■□□ 2.4
RGPD4Q7Z3J3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
RGPD4Q7Z3J3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC30.03■■■□□ 2.4
RGPD4Q7Z3J3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC30.03■■■□□ 2.4
RGPD4Q7Z3J3 BX842568.3-201ENST00000418104 571 ntBASIC30.03■■■□□ 2.4
RGPD4Q7Z3J3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.02■■■□□ 2.4
RGPD4Q7Z3J3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RGPD4Q7Z3J3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC30.01■■■□□ 2.4
RGPD4Q7Z3J3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
RGPD4Q7Z3J3 AC233992.3-201ENST00000607491 485 ntBASIC30.01■■■□□ 2.39
RGPD4Q7Z3J3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.01■■■□□ 2.39
RGPD4Q7Z3J3 HLA-L-209ENST00000420110 1011 ntBASIC30■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms