Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PPP4R3AQ6IN85 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PPP4R3AQ6IN85 AC137630.3-201ENST00000607245 391 ntBASIC26.4■■□□□ 1.82
PPP4R3AQ6IN85 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
PPP4R3AQ6IN85 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PPP4R3AQ6IN85 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PPP4R3AQ6IN85 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
PPP4R3AQ6IN85 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PPP4R3AQ6IN85 HLA-L-211ENST00000482052 1765 ntBASIC26.39■■□□□ 1.82
PPP4R3AQ6IN85 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.39■■□□□ 1.82
PPP4R3AQ6IN85 AF131216.4-201ENST00000638924 1588 ntBASIC26.39■■□□□ 1.82
PPP4R3AQ6IN85 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
PPP4R3AQ6IN85 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PPP4R3AQ6IN85 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PPP4R3AQ6IN85 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
PPP4R3AQ6IN85 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.38■■□□□ 1.81
PPP4R3AQ6IN85 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.38■■□□□ 1.81
PPP4R3AQ6IN85 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.38■■□□□ 1.81
PPP4R3AQ6IN85 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.38■■□□□ 1.81
PPP4R3AQ6IN85 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PPP4R3AQ6IN85 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.37■■□□□ 1.81
PPP4R3AQ6IN85 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PPP4R3AQ6IN85 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PPP4R3AQ6IN85 AC009299.2-201ENST00000482477 511 ntBASIC26.37■■□□□ 1.81
PPP4R3AQ6IN85 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PPP4R3AQ6IN85 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
PPP4R3AQ6IN85 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PPP4R3AQ6IN85 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.36■■□□□ 1.81
PPP4R3AQ6IN85 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PPP4R3AQ6IN85 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.36■■□□□ 1.81
PPP4R3AQ6IN85 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
PPP4R3AQ6IN85 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.36■■□□□ 1.81
PPP4R3AQ6IN85 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.36■■□□□ 1.81
PPP4R3AQ6IN85 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PPP4R3AQ6IN85 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
PPP4R3AQ6IN85 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.36■■□□□ 1.81
PPP4R3AQ6IN85 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PPP4R3AQ6IN85 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PPP4R3AQ6IN85 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.36■■□□□ 1.81
PPP4R3AQ6IN85 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PPP4R3AQ6IN85 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PPP4R3AQ6IN85 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PPP4R3AQ6IN85 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.35■■□□□ 1.81
PPP4R3AQ6IN85 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.35■■□□□ 1.81
PPP4R3AQ6IN85 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.35■■□□□ 1.81
PPP4R3AQ6IN85 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
PPP4R3AQ6IN85 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
PPP4R3AQ6IN85 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
PPP4R3AQ6IN85 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
PPP4R3AQ6IN85 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PPP4R3AQ6IN85 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PPP4R3AQ6IN85 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.33■■□□□ 1.81
PPP4R3AQ6IN85 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.33■■□□□ 1.81
PPP4R3AQ6IN85 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.33■■□□□ 1.81
PPP4R3AQ6IN85 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.33■■□□□ 1.81
PPP4R3AQ6IN85 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
PPP4R3AQ6IN85 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PPP4R3AQ6IN85 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
PPP4R3AQ6IN85 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PPP4R3AQ6IN85 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
PPP4R3AQ6IN85 Z92544.1-202ENST00000571933 1220 ntBASIC26.32■■□□□ 1.8
PPP4R3AQ6IN85 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PPP4R3AQ6IN85 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PPP4R3AQ6IN85 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.32■■□□□ 1.8
PPP4R3AQ6IN85 AL139125.2-201ENST00000623134 1869 ntBASIC26.32■■□□□ 1.8
PPP4R3AQ6IN85 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PPP4R3AQ6IN85 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PPP4R3AQ6IN85 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.31■■□□□ 1.8
PPP4R3AQ6IN85 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PPP4R3AQ6IN85 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
PPP4R3AQ6IN85 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PPP4R3AQ6IN85 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PPP4R3AQ6IN85 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.3■■□□□ 1.8
PPP4R3AQ6IN85 AL035685.1-201ENST00000636663 812 ntBASIC26.3■■□□□ 1.8
PPP4R3AQ6IN85 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.3■■□□□ 1.8
PPP4R3AQ6IN85 AC021242.3-201ENST00000607598 1377 ntBASIC26.3■■□□□ 1.8
PPP4R3AQ6IN85 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PPP4R3AQ6IN85 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PPP4R3AQ6IN85 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.29■■□□□ 1.8
PPP4R3AQ6IN85 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PPP4R3AQ6IN85 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.29■■□□□ 1.8
PPP4R3AQ6IN85 BX664725.1-201ENST00000438252 379 ntBASIC26.29■■□□□ 1.8
PPP4R3AQ6IN85 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.29■■□□□ 1.8
PPP4R3AQ6IN85 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.28■■□□□ 1.8
PPP4R3AQ6IN85 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
PPP4R3AQ6IN85 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
PPP4R3AQ6IN85 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PPP4R3AQ6IN85 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PPP4R3AQ6IN85 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PPP4R3AQ6IN85 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PPP4R3AQ6IN85 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PPP4R3AQ6IN85 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
PPP4R3AQ6IN85 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PPP4R3AQ6IN85 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PPP4R3AQ6IN85 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
PPP4R3AQ6IN85 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PPP4R3AQ6IN85 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
PPP4R3AQ6IN85 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PPP4R3AQ6IN85 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PPP4R3AQ6IN85 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms