Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL139125.2-201ENST00000623134 1869 ntBASIC20.79■□□□□ 0.92
H3F3AP84243 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H3F3AP84243 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H3F3AP84243 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
H3F3AP84243 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.79■□□□□ 0.92
H3F3AP84243 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
H3F3AP84243 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
H3F3AP84243 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.78■□□□□ 0.92
H3F3AP84243 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3F3AP84243 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3F3AP84243 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3F3AP84243 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3F3AP84243 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
H3F3AP84243 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
H3F3AP84243 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.77■□□□□ 0.92
H3F3AP84243 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
H3F3AP84243 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.77■□□□□ 0.92
H3F3AP84243 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.76■□□□□ 0.91
H3F3AP84243 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3AP84243 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3AP84243 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
H3F3AP84243 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3AP84243 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3AP84243 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3AP84243 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
H3F3AP84243 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
H3F3AP84243 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
H3F3AP84243 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3AP84243 AF131216.4-201ENST00000638924 1588 ntBASIC20.76■□□□□ 0.91
H3F3AP84243 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3AP84243 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.75■□□□□ 0.91
H3F3AP84243 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.75■□□□□ 0.91
H3F3AP84243 AC137630.3-201ENST00000607245 391 ntBASIC20.75■□□□□ 0.91
H3F3AP84243 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
H3F3AP84243 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H3F3AP84243 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H3F3AP84243 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3F3AP84243 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
H3F3AP84243 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.74■□□□□ 0.91
H3F3AP84243 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H3F3AP84243 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H3F3AP84243 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
H3F3AP84243 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
H3F3AP84243 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
H3F3AP84243 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
H3F3AP84243 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.74■□□□□ 0.91
H3F3AP84243 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.74■□□□□ 0.91
H3F3AP84243 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.73■□□□□ 0.91
H3F3AP84243 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
H3F3AP84243 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.73■□□□□ 0.91
H3F3AP84243 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3AP84243 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.72■□□□□ 0.91
H3F3AP84243 AL451085.2-201ENST00000605085 799 ntBASIC20.72■□□□□ 0.91
H3F3AP84243 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3AP84243 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3AP84243 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.72■□□□□ 0.91
H3F3AP84243 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
H3F3AP84243 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3F3AP84243 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
H3F3AP84243 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
H3F3AP84243 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H3F3AP84243 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
H3F3AP84243 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H3F3AP84243 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.71■□□□□ 0.91
H3F3AP84243 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.71■□□□□ 0.91
H3F3AP84243 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H3F3AP84243 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
H3F3AP84243 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
H3F3AP84243 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.71■□□□□ 0.91
H3F3AP84243 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
H3F3AP84243 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.7■□□□□ 0.91
H3F3AP84243 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
H3F3AP84243 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
H3F3AP84243 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H3F3AP84243 LINC00543-201ENST00000567234 1845 ntBASIC20.7■□□□□ 0.9
H3F3AP84243 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
H3F3AP84243 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H3F3AP84243 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
H3F3AP84243 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.7■□□□□ 0.9
H3F3AP84243 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H3F3AP84243 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H3F3AP84243 LINC01124-201ENST00000409786 2117 ntBASIC20.69■□□□□ 0.9
H3F3AP84243 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
H3F3AP84243 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
H3F3AP84243 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.69■□□□□ 0.9
H3F3AP84243 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.69■□□□□ 0.9
H3F3AP84243 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.69■□□□□ 0.9
H3F3AP84243 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
H3F3AP84243 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3F3AP84243 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3F3AP84243 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3F3AP84243 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3F3AP84243 AC141586.4-201ENST00000624558 1573 ntBASIC20.68■□□□□ 0.9
H3F3AP84243 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3F3AP84243 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.68■□□□□ 0.9
H3F3AP84243 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3F3AP84243 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
H3F3AP84243 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.68■□□□□ 0.9
H3F3AP84243 AC009299.2-201ENST00000482477 511 ntBASIC20.68■□□□□ 0.9
H3F3AP84243 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms