Protein–RNA interactions for Protein: P0C1H6

H2BFM, Histone H2B type F-M, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2BFMP0C1H6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
H2BFMP0C1H6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
H2BFMP0C1H6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
H2BFMP0C1H6 SPCS2P3-201ENST00000500401 656 ntBASIC20.4■□□□□ 0.86
H2BFMP0C1H6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.4■□□□□ 0.86
H2BFMP0C1H6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
H2BFMP0C1H6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.4■□□□□ 0.86
H2BFMP0C1H6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
H2BFMP0C1H6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.4■□□□□ 0.86
H2BFMP0C1H6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
H2BFMP0C1H6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
H2BFMP0C1H6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
H2BFMP0C1H6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
H2BFMP0C1H6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
H2BFMP0C1H6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
H2BFMP0C1H6 RARRES2P2-201ENST00000394842 485 ntBASIC20.39■□□□□ 0.85
H2BFMP0C1H6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
H2BFMP0C1H6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.39■□□□□ 0.85
H2BFMP0C1H6 MIR6765-201ENST00000614092 87 ntBASIC20.39■□□□□ 0.85
H2BFMP0C1H6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
H2BFMP0C1H6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
H2BFMP0C1H6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
H2BFMP0C1H6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
H2BFMP0C1H6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2BFMP0C1H6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2BFMP0C1H6 ABCB10P4-201ENST00000566803 2184 ntBASIC20.38■□□□□ 0.85
H2BFMP0C1H6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.38■□□□□ 0.85
H2BFMP0C1H6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.38■□□□□ 0.85
H2BFMP0C1H6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
H2BFMP0C1H6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.38■□□□□ 0.85
H2BFMP0C1H6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.38■□□□□ 0.85
H2BFMP0C1H6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2BFMP0C1H6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2BFMP0C1H6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2BFMP0C1H6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2BFMP0C1H6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2BFMP0C1H6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2BFMP0C1H6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2BFMP0C1H6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
H2BFMP0C1H6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2BFMP0C1H6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.37■□□□□ 0.85
H2BFMP0C1H6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
H2BFMP0C1H6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
H2BFMP0C1H6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.37■□□□□ 0.85
H2BFMP0C1H6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
H2BFMP0C1H6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.37■□□□□ 0.85
H2BFMP0C1H6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2BFMP0C1H6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H2BFMP0C1H6 DUX4L9-201ENST00000449051 1259 ntBASIC20.36■□□□□ 0.85
H2BFMP0C1H6 AC087393.1-201ENST00000582896 145 ntBASIC20.36■□□□□ 0.85
H2BFMP0C1H6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.36■□□□□ 0.85
H2BFMP0C1H6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2BFMP0C1H6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H2BFMP0C1H6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.36■□□□□ 0.85
H2BFMP0C1H6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H2BFMP0C1H6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2BFMP0C1H6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
H2BFMP0C1H6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.34■□□□□ 0.85
H2BFMP0C1H6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
H2BFMP0C1H6 AL592295.1-201ENST00000400984 884 ntBASIC20.34■□□□□ 0.85
H2BFMP0C1H6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
H2BFMP0C1H6 HSD17B1P1-201ENST00000590052 955 ntBASIC20.34■□□□□ 0.85
H2BFMP0C1H6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
H2BFMP0C1H6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
H2BFMP0C1H6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.34■□□□□ 0.85
H2BFMP0C1H6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
H2BFMP0C1H6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2BFMP0C1H6 AC090877.2-201ENST00000558441 1738 ntBASIC20.33■□□□□ 0.85
H2BFMP0C1H6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
H2BFMP0C1H6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
H2BFMP0C1H6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.33■□□□□ 0.85
H2BFMP0C1H6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.33■□□□□ 0.85
H2BFMP0C1H6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H2BFMP0C1H6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.33■□□□□ 0.84
H2BFMP0C1H6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
H2BFMP0C1H6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
H2BFMP0C1H6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H2BFMP0C1H6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
H2BFMP0C1H6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
H2BFMP0C1H6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.32■□□□□ 0.84
H2BFMP0C1H6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2BFMP0C1H6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
H2BFMP0C1H6 U85056.1-201ENST00000616429 682 ntBASIC20.32■□□□□ 0.84
H2BFMP0C1H6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2BFMP0C1H6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms