Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
KCNQ3O43525 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
KCNQ3O43525 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
KCNQ3O43525 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
KCNQ3O43525 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC30.15■■■□□ 2.42
KCNQ3O43525 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.15■■■□□ 2.42
KCNQ3O43525 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC30.15■■■□□ 2.42
KCNQ3O43525 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
KCNQ3O43525 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC30.14■■■□□ 2.42
KCNQ3O43525 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
KCNQ3O43525 MIR638-201ENST00000385237 100 ntBASIC30.14■■■□□ 2.42
KCNQ3O43525 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
KCNQ3O43525 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
KCNQ3O43525 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.13■■■□□ 2.41
KCNQ3O43525 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC30.13■■■□□ 2.41
KCNQ3O43525 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
KCNQ3O43525 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC30.13■■■□□ 2.41
KCNQ3O43525 NALT1-201ENST00000429224 738 ntTSL 5 BASIC30.13■■■□□ 2.41
KCNQ3O43525 MIR6722-201ENST00000617286 78 ntBASIC30.12■■■□□ 2.41
KCNQ3O43525 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.12■■■□□ 2.41
KCNQ3O43525 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.12■■■□□ 2.41
KCNQ3O43525 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC30.12■■■□□ 2.41
KCNQ3O43525 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
KCNQ3O43525 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
KCNQ3O43525 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
KCNQ3O43525 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC30.11■■■□□ 2.41
KCNQ3O43525 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.11■■■□□ 2.41
KCNQ3O43525 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
KCNQ3O43525 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
KCNQ3O43525 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
KCNQ3O43525 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC30.11■■■□□ 2.41
KCNQ3O43525 AC110285.6-201ENST00000617652 491 ntBASIC30.11■■■□□ 2.41
KCNQ3O43525 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
KCNQ3O43525 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
KCNQ3O43525 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
KCNQ3O43525 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
KCNQ3O43525 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
KCNQ3O43525 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
KCNQ3O43525 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
KCNQ3O43525 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC30.1■■■□□ 2.41
KCNQ3O43525 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC30.1■■■□□ 2.41
KCNQ3O43525 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
KCNQ3O43525 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
KCNQ3O43525 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC30.1■■■□□ 2.41
KCNQ3O43525 AL139246.5-201ENST00000606645 996 ntBASIC30.09■■■□□ 2.41
KCNQ3O43525 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
KCNQ3O43525 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
KCNQ3O43525 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
KCNQ3O43525 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
KCNQ3O43525 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
KCNQ3O43525 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
KCNQ3O43525 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC30.07■■■□□ 2.4
KCNQ3O43525 AC145676.1-201ENST00000514988 2004 ntBASIC30.07■■■□□ 2.4
KCNQ3O43525 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC30.07■■■□□ 2.4
KCNQ3O43525 RALB-208ENST00000631312 311 ntTSL 5 BASIC30.07■■■□□ 2.4
KCNQ3O43525 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
KCNQ3O43525 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC30.06■■■□□ 2.4
KCNQ3O43525 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
KCNQ3O43525 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.06■■■□□ 2.4
KCNQ3O43525 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
KCNQ3O43525 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC30.06■■■□□ 2.4
KCNQ3O43525 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
KCNQ3O43525 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.06■■■□□ 2.4
KCNQ3O43525 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
KCNQ3O43525 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC30.05■■■□□ 2.4
KCNQ3O43525 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC30.05■■■□□ 2.4
KCNQ3O43525 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC30.05■■■□□ 2.4
KCNQ3O43525 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC30.05■■■□□ 2.4
KCNQ3O43525 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC30.05■■■□□ 2.4
KCNQ3O43525 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
KCNQ3O43525 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
KCNQ3O43525 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
KCNQ3O43525 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
KCNQ3O43525 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC30.04■■■□□ 2.4
KCNQ3O43525 AC096631.2-201ENST00000436136 790 ntBASIC30.04■■■□□ 2.4
KCNQ3O43525 AC004448.1-201ENST00000458332 883 ntBASIC30.04■■■□□ 2.4
KCNQ3O43525 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC30.04■■■□□ 2.4
KCNQ3O43525 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
KCNQ3O43525 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30.03■■■□□ 2.4
KCNQ3O43525 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC30.03■■■□□ 2.4
KCNQ3O43525 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
KCNQ3O43525 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.02■■■□□ 2.4
KCNQ3O43525 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
KCNQ3O43525 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.02■■■□□ 2.4
KCNQ3O43525 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC30.02■■■□□ 2.4
KCNQ3O43525 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC30.02■■■□□ 2.4
KCNQ3O43525 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC30.02■■■□□ 2.4
KCNQ3O43525 AC131274.2-201ENST00000580697 1507 ntBASIC30.01■■■□□ 2.4
KCNQ3O43525 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.4
KCNQ3O43525 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
KCNQ3O43525 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC30.01■■■□□ 2.39
KCNQ3O43525 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
KCNQ3O43525 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
KCNQ3O43525 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
KCNQ3O43525 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC30■■■□□ 2.39
KCNQ3O43525 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC30■■■□□ 2.39
KCNQ3O43525 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC30■■■□□ 2.39
KCNQ3O43525 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
KCNQ3O43525 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
KCNQ3O43525 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms