Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF223E7ERA6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF223E7ERA6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF223E7ERA6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF223E7ERA6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF223E7ERA6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF223E7ERA6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF223E7ERA6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF223E7ERA6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF223E7ERA6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
RNF223E7ERA6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF223E7ERA6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF223E7ERA6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RNF223E7ERA6 DUX4L19-201ENST00000557448 1267 ntBASIC19.35■□□□□ 0.69
RNF223E7ERA6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.35■□□□□ 0.69
RNF223E7ERA6 AC142086.6-201ENST00000621154 1765 ntBASIC19.34■□□□□ 0.69
RNF223E7ERA6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RNF223E7ERA6 MIR939-201ENST00000401314 82 ntBASIC19.34■□□□□ 0.69
RNF223E7ERA6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF223E7ERA6 AC004448.1-201ENST00000458332 883 ntBASIC19.34■□□□□ 0.69
RNF223E7ERA6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF223E7ERA6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF223E7ERA6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF223E7ERA6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF223E7ERA6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.33■□□□□ 0.69
RNF223E7ERA6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF223E7ERA6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF223E7ERA6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.33■□□□□ 0.68
RNF223E7ERA6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF223E7ERA6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.33■□□□□ 0.68
RNF223E7ERA6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF223E7ERA6 AP001330.3-201ENST00000520123 633 ntBASIC19.33■□□□□ 0.68
RNF223E7ERA6 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.33■□□□□ 0.68
RNF223E7ERA6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RNF223E7ERA6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF223E7ERA6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF223E7ERA6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF223E7ERA6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF223E7ERA6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF223E7ERA6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF223E7ERA6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF223E7ERA6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF223E7ERA6 SYT6-210ENST00000641643 1587 ntBASIC19.32■□□□□ 0.68
RNF223E7ERA6 AC005703.6-201ENST00000623265 1329 ntBASIC19.32■□□□□ 0.68
RNF223E7ERA6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF223E7ERA6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF223E7ERA6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF223E7ERA6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.32■□□□□ 0.68
RNF223E7ERA6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RNF223E7ERA6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF223E7ERA6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF223E7ERA6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF223E7ERA6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF223E7ERA6 AC097639.1-201ENST00000565519 1891 ntBASIC19.31■□□□□ 0.68
RNF223E7ERA6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF223E7ERA6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF223E7ERA6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF223E7ERA6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF223E7ERA6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF223E7ERA6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF223E7ERA6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF223E7ERA6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF223E7ERA6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF223E7ERA6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF223E7ERA6 AC091305.1-201ENST00000479476 895 ntBASIC19.3■□□□□ 0.68
RNF223E7ERA6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.3■□□□□ 0.68
RNF223E7ERA6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF223E7ERA6 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF223E7ERA6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF223E7ERA6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF223E7ERA6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF223E7ERA6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RNF223E7ERA6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF223E7ERA6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF223E7ERA6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF223E7ERA6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF223E7ERA6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF223E7ERA6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.29■□□□□ 0.68
RNF223E7ERA6 MIR4767-201ENST00000582827 78 ntBASIC19.29■□□□□ 0.68
RNF223E7ERA6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF223E7ERA6 MIR6821-201ENST00000617625 74 ntBASIC19.29■□□□□ 0.68
RNF223E7ERA6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
RNF223E7ERA6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF223E7ERA6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF223E7ERA6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RNF223E7ERA6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF223E7ERA6 AC092171.4-201ENST00000609130 632 ntBASIC19.28■□□□□ 0.68
RNF223E7ERA6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF223E7ERA6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RNF223E7ERA6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF223E7ERA6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
RNF223E7ERA6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF223E7ERA6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF223E7ERA6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF223E7ERA6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF223E7ERA6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF223E7ERA6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF223E7ERA6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF223E7ERA6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF223E7ERA6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms