Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.76■□□□□ 0.27
IGHV4-28A0A0C4DH34 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.76■□□□□ 0.27
IGHV4-28A0A0C4DH34 KRT16P3-201ENST00000439127 1283 ntBASIC16.76■□□□□ 0.27
IGHV4-28A0A0C4DH34 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.76■□□□□ 0.27
IGHV4-28A0A0C4DH34 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.76■□□□□ 0.27
IGHV4-28A0A0C4DH34 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.76■□□□□ 0.27
IGHV4-28A0A0C4DH34 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.76■□□□□ 0.27
IGHV4-28A0A0C4DH34 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IGHV4-28A0A0C4DH34 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IGHV4-28A0A0C4DH34 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IGHV4-28A0A0C4DH34 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGHV4-28A0A0C4DH34 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGHV4-28A0A0C4DH34 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGHV4-28A0A0C4DH34 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGHV4-28A0A0C4DH34 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGHV4-28A0A0C4DH34 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
IGHV4-28A0A0C4DH34 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IGHV4-28A0A0C4DH34 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IGHV4-28A0A0C4DH34 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IGHV4-28A0A0C4DH34 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IGHV4-28A0A0C4DH34 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
IGHV4-28A0A0C4DH34 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.74■□□□□ 0.27
IGHV4-28A0A0C4DH34 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.74■□□□□ 0.27
IGHV4-28A0A0C4DH34 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.74■□□□□ 0.27
IGHV4-28A0A0C4DH34 MIR6089-201ENST00000616698 64 ntBASIC16.74■□□□□ 0.27
IGHV4-28A0A0C4DH34 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.74■□□□□ 0.27
IGHV4-28A0A0C4DH34 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IGHV4-28A0A0C4DH34 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.74■□□□□ 0.27
IGHV4-28A0A0C4DH34 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IGHV4-28A0A0C4DH34 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGHV4-28A0A0C4DH34 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGHV4-28A0A0C4DH34 MTDHP2-201ENST00000601468 714 ntBASIC16.73■□□□□ 0.27
IGHV4-28A0A0C4DH34 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGHV4-28A0A0C4DH34 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IGHV4-28A0A0C4DH34 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.73■□□□□ 0.27
IGHV4-28A0A0C4DH34 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGHV4-28A0A0C4DH34 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IGHV4-28A0A0C4DH34 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGHV4-28A0A0C4DH34 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
IGHV4-28A0A0C4DH34 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
IGHV4-28A0A0C4DH34 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGHV4-28A0A0C4DH34 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
IGHV4-28A0A0C4DH34 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IGHV4-28A0A0C4DH34 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGHV4-28A0A0C4DH34 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
IGHV4-28A0A0C4DH34 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.72■□□□□ 0.27
IGHV4-28A0A0C4DH34 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.72■□□□□ 0.27
IGHV4-28A0A0C4DH34 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGHV4-28A0A0C4DH34 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.72■□□□□ 0.27
IGHV4-28A0A0C4DH34 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGHV4-28A0A0C4DH34 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IGHV4-28A0A0C4DH34 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGHV4-28A0A0C4DH34 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGHV4-28A0A0C4DH34 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IGHV4-28A0A0C4DH34 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IGHV4-28A0A0C4DH34 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGHV4-28A0A0C4DH34 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.71■□□□□ 0.27
IGHV4-28A0A0C4DH34 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGHV4-28A0A0C4DH34 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IGHV4-28A0A0C4DH34 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
IGHV4-28A0A0C4DH34 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.71■□□□□ 0.27
IGHV4-28A0A0C4DH34 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGHV4-28A0A0C4DH34 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.71■□□□□ 0.27
IGHV4-28A0A0C4DH34 AC010997.5-201ENST00000609182 354 ntBASIC16.71■□□□□ 0.27
IGHV4-28A0A0C4DH34 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IGHV4-28A0A0C4DH34 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC16.71■□□□□ 0.27
IGHV4-28A0A0C4DH34 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
IGHV4-28A0A0C4DH34 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.7■□□□□ 0.26
IGHV4-28A0A0C4DH34 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IGHV4-28A0A0C4DH34 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IGHV4-28A0A0C4DH34 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGHV4-28A0A0C4DH34 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGHV4-28A0A0C4DH34 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGHV4-28A0A0C4DH34 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.69■□□□□ 0.26
IGHV4-28A0A0C4DH34 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.69■□□□□ 0.26
IGHV4-28A0A0C4DH34 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.69■□□□□ 0.26
IGHV4-28A0A0C4DH34 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGHV4-28A0A0C4DH34 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGHV4-28A0A0C4DH34 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGHV4-28A0A0C4DH34 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.68■□□□□ 0.26
IGHV4-28A0A0C4DH34 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IGHV4-28A0A0C4DH34 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGHV4-28A0A0C4DH34 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGHV4-28A0A0C4DH34 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGHV4-28A0A0C4DH34 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms