Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV12-3A0A0B4J271 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV12-3A0A0B4J271 HLA-L-211ENST00000482052 1765 ntBASIC17.17■□□□□ 0.34
TRAV12-3A0A0B4J271 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV12-3A0A0B4J271 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV12-3A0A0B4J271 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV12-3A0A0B4J271 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV12-3A0A0B4J271 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV12-3A0A0B4J271 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRAV12-3A0A0B4J271 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.17■□□□□ 0.34
TRAV12-3A0A0B4J271 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV12-3A0A0B4J271 MIR6765-201ENST00000614092 87 ntBASIC17.17■□□□□ 0.34
TRAV12-3A0A0B4J271 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV12-3A0A0B4J271 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV12-3A0A0B4J271 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV12-3A0A0B4J271 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV12-3A0A0B4J271 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV12-3A0A0B4J271 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV12-3A0A0B4J271 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV12-3A0A0B4J271 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRAV12-3A0A0B4J271 DUX4L9-201ENST00000449051 1259 ntBASIC17.16■□□□□ 0.34
TRAV12-3A0A0B4J271 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRAV12-3A0A0B4J271 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV12-3A0A0B4J271 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV12-3A0A0B4J271 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV12-3A0A0B4J271 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV12-3A0A0B4J271 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV12-3A0A0B4J271 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TRAV12-3A0A0B4J271 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV12-3A0A0B4J271 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV12-3A0A0B4J271 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV12-3A0A0B4J271 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRAV12-3A0A0B4J271 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.15■□□□□ 0.34
TRAV12-3A0A0B4J271 U85056.1-201ENST00000616429 682 ntBASIC17.15■□□□□ 0.34
TRAV12-3A0A0B4J271 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
TRAV12-3A0A0B4J271 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV12-3A0A0B4J271 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV12-3A0A0B4J271 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRAV12-3A0A0B4J271 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
TRAV12-3A0A0B4J271 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-3A0A0B4J271 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-3A0A0B4J271 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-3A0A0B4J271 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV12-3A0A0B4J271 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-3A0A0B4J271 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRAV12-3A0A0B4J271 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-3A0A0B4J271 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-3A0A0B4J271 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-3A0A0B4J271 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-3A0A0B4J271 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-3A0A0B4J271 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV12-3A0A0B4J271 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-3A0A0B4J271 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV12-3A0A0B4J271 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-3A0A0B4J271 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.13■□□□□ 0.33
TRAV12-3A0A0B4J271 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV12-3A0A0B4J271 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-3A0A0B4J271 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-3A0A0B4J271 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-3A0A0B4J271 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-3A0A0B4J271 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-3A0A0B4J271 AC004812.2-201ENST00000611079 2094 ntBASIC17.12■□□□□ 0.33
TRAV12-3A0A0B4J271 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-3A0A0B4J271 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-3A0A0B4J271 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-3A0A0B4J271 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV12-3A0A0B4J271 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-3A0A0B4J271 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV12-3A0A0B4J271 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-3A0A0B4J271 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-3A0A0B4J271 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TRAV12-3A0A0B4J271 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-3A0A0B4J271 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-3A0A0B4J271 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.11■□□□□ 0.33
TRAV12-3A0A0B4J271 AC087393.1-201ENST00000582896 145 ntBASIC17.11■□□□□ 0.33
TRAV12-3A0A0B4J271 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-3A0A0B4J271 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV12-3A0A0B4J271 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRAV12-3A0A0B4J271 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-3A0A0B4J271 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-3A0A0B4J271 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV12-3A0A0B4J271 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-3A0A0B4J271 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV12-3A0A0B4J271 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-3A0A0B4J271 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-3A0A0B4J271 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRAV12-3A0A0B4J271 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV12-3A0A0B4J271 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-3A0A0B4J271 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV12-3A0A0B4J271 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-3A0A0B4J271 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.1■□□□□ 0.33
TRAV12-3A0A0B4J271 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-3A0A0B4J271 ABCB10P4-201ENST00000566803 2184 ntBASIC17.1■□□□□ 0.33
TRAV12-3A0A0B4J271 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV12-3A0A0B4J271 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-3A0A0B4J271 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV12-3A0A0B4J271 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-3A0A0B4J271 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV12-3A0A0B4J271 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV12-3A0A0B4J271 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms