Protein–RNA interactions for Protein: A0A075B6T6

TRAV12-2, T-cell receptor alpha variable 12-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-2A0A075B6T6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV12-2A0A075B6T6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV12-2A0A075B6T6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV12-2A0A075B6T6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.16■□□□□ 0.34
TRAV12-2A0A075B6T6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV12-2A0A075B6T6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV12-2A0A075B6T6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRAV12-2A0A075B6T6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV12-2A0A075B6T6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV12-2A0A075B6T6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV12-2A0A075B6T6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRAV12-2A0A075B6T6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV12-2A0A075B6T6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV12-2A0A075B6T6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV12-2A0A075B6T6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV12-2A0A075B6T6 AL592295.1-201ENST00000400984 884 ntBASIC17.15■□□□□ 0.34
TRAV12-2A0A075B6T6 AC004987.1-201ENST00000428627 508 ntBASIC17.15■□□□□ 0.34
TRAV12-2A0A075B6T6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV12-2A0A075B6T6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV12-2A0A075B6T6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV12-2A0A075B6T6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV12-2A0A075B6T6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV12-2A0A075B6T6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV12-2A0A075B6T6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TRAV12-2A0A075B6T6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV12-2A0A075B6T6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-2A0A075B6T6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-2A0A075B6T6 ATP5G2P3-201ENST00000429083 425 ntBASIC17.14■□□□□ 0.33
TRAV12-2A0A075B6T6 LONRF2P2-201ENST00000439212 571 ntBASIC17.14■□□□□ 0.33
TRAV12-2A0A075B6T6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV12-2A0A075B6T6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV12-2A0A075B6T6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-2A0A075B6T6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TRAV12-2A0A075B6T6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-2A0A075B6T6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-2A0A075B6T6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV12-2A0A075B6T6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV12-2A0A075B6T6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-2A0A075B6T6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-2A0A075B6T6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-2A0A075B6T6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-2A0A075B6T6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRAV12-2A0A075B6T6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRAV12-2A0A075B6T6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-2A0A075B6T6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV12-2A0A075B6T6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-2A0A075B6T6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-2A0A075B6T6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-2A0A075B6T6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-2A0A075B6T6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV12-2A0A075B6T6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-2A0A075B6T6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV12-2A0A075B6T6 AC004812.2-201ENST00000611079 2094 ntBASIC17.12■□□□□ 0.33
TRAV12-2A0A075B6T6 AC090877.2-201ENST00000558441 1738 ntBASIC17.12■□□□□ 0.33
TRAV12-2A0A075B6T6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-2A0A075B6T6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-2A0A075B6T6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-2A0A075B6T6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV12-2A0A075B6T6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-2A0A075B6T6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TRAV12-2A0A075B6T6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-2A0A075B6T6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-2A0A075B6T6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-2A0A075B6T6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-2A0A075B6T6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-2A0A075B6T6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-2A0A075B6T6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV12-2A0A075B6T6 AC141586.4-201ENST00000624558 1573 ntBASIC17.11■□□□□ 0.33
TRAV12-2A0A075B6T6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-2A0A075B6T6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-2A0A075B6T6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-2A0A075B6T6 TSPY13P-201ENST00000338964 914 ntBASIC17.1■□□□□ 0.33
TRAV12-2A0A075B6T6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.1■□□□□ 0.33
TRAV12-2A0A075B6T6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-2A0A075B6T6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.1■□□□□ 0.33
TRAV12-2A0A075B6T6 ABCB10P4-201ENST00000566803 2184 ntBASIC17.1■□□□□ 0.33
TRAV12-2A0A075B6T6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-2A0A075B6T6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV12-2A0A075B6T6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV12-2A0A075B6T6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV12-2A0A075B6T6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV12-2A0A075B6T6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV12-2A0A075B6T6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
TRAV12-2A0A075B6T6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV12-2A0A075B6T6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRAV12-2A0A075B6T6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV12-2A0A075B6T6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV12-2A0A075B6T6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAV12-2A0A075B6T6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-2A0A075B6T6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV12-2A0A075B6T6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-2A0A075B6T6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-2A0A075B6T6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-2A0A075B6T6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAV12-2A0A075B6T6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-2A0A075B6T6 AC012354.3-201ENST00000623734 483 ntBASIC17.08■□□□□ 0.32
TRAV12-2A0A075B6T6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-2A0A075B6T6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-2A0A075B6T6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-2A0A075B6T6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms