Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV25-1A0A075B6N4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 LINC00565-201ENST00000562710 2331 ntBASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 MIR3960-201ENST00000583311 91 ntBASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRBV25-1A0A075B6N4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 C9orf163-202ENST00000624034 2573 ntBASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV25-1A0A075B6N4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV25-1A0A075B6N4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV25-1A0A075B6N4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRBV25-1A0A075B6N4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV25-1A0A075B6N4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.59■□□□□ 0.25
TRBV25-1A0A075B6N4 MIR7108-201ENST00000614319 87 ntBASIC16.59■□□□□ 0.25
TRBV25-1A0A075B6N4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV25-1A0A075B6N4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV25-1A0A075B6N4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV25-1A0A075B6N4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV25-1A0A075B6N4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV25-1A0A075B6N4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV25-1A0A075B6N4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.58■□□□□ 0.25
TRBV25-1A0A075B6N4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.58■□□□□ 0.25
TRBV25-1A0A075B6N4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV25-1A0A075B6N4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TRBV25-1A0A075B6N4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV25-1A0A075B6N4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV25-1A0A075B6N4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV25-1A0A075B6N4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV25-1A0A075B6N4 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.58■□□□□ 0.24
TRBV25-1A0A075B6N4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV25-1A0A075B6N4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.58■□□□□ 0.24
TRBV25-1A0A075B6N4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV25-1A0A075B6N4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV25-1A0A075B6N4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV25-1A0A075B6N4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV25-1A0A075B6N4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV25-1A0A075B6N4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV25-1A0A075B6N4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.57■□□□□ 0.24
TRBV25-1A0A075B6N4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV25-1A0A075B6N4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV25-1A0A075B6N4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV25-1A0A075B6N4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV25-1A0A075B6N4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV25-1A0A075B6N4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV25-1A0A075B6N4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV25-1A0A075B6N4 AC060814.1-201ENST00000554326 538 ntBASIC16.57■□□□□ 0.24
TRBV25-1A0A075B6N4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV25-1A0A075B6N4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV25-1A0A075B6N4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV25-1A0A075B6N4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV25-1A0A075B6N4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV25-1A0A075B6N4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRBV25-1A0A075B6N4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV25-1A0A075B6N4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV25-1A0A075B6N4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV25-1A0A075B6N4 AL157400.5-201ENST00000507624 621 ntBASIC16.56■□□□□ 0.24
TRBV25-1A0A075B6N4 AC025884.2-201ENST00000553429 711 ntBASIC16.56■□□□□ 0.24
TRBV25-1A0A075B6N4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC16.56■□□□□ 0.24
TRBV25-1A0A075B6N4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV25-1A0A075B6N4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV25-1A0A075B6N4 AP003733.4-201ENST00000623785 1697 ntBASIC16.56■□□□□ 0.24
TRBV25-1A0A075B6N4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV25-1A0A075B6N4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV25-1A0A075B6N4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 SMPD5-203ENST00000639008 1464 ntBASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms