Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 YBX2P1-201ENST00000394192 760 ntBASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 MIR940-201ENST00000401276 94 ntBASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 RARRES2P9-201ENST00000565168 469 ntBASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 BX640515.1-201ENST00000617215 977 ntBASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 AL592309.1-201ENST00000443127 649 ntBASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 FDX1P1-201ENST00000449115 551 ntBASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 KRT8P23-201ENST00000560090 1207 ntBASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 AL121894.2-201ENST00000602977 491 ntBASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.17□□□□□ -0.3
HDHD3Q9BSH5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms