Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 AC245100.5-201ENST00000452108 331 ntBASIC15.19■□□□□ 0.02
HIPK4Q8NE63 KRT18P34-201ENST00000488218 1270 ntBASIC15.19■□□□□ 0.02
HIPK4Q8NE63 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 AC109635.5-201ENST00000533593 962 ntBASIC15.19■□□□□ 0.02
HIPK4Q8NE63 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 AL365330.1-201ENST00000607459 531 ntBASIC15.19■□□□□ 0.02
HIPK4Q8NE63 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.19■□□□□ 0.02
HIPK4Q8NE63 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HIPK4Q8NE63 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms