Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK1P53667 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK1P53667 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK1P53667 REXO1L8P-201ENST00000604378 1897 ntBASIC15.33■□□□□ 0.04
LIMK1P53667 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK1P53667 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.33■□□□□ 0.04
LIMK1P53667 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.33■□□□□ 0.04
LIMK1P53667 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK1P53667 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.33■□□□□ 0.04
LIMK1P53667 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK1P53667 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK1P53667 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
LIMK1P53667 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.33■□□□□ 0.04
LIMK1P53667 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK1P53667 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.33■□□□□ 0.04
LIMK1P53667 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LIMK1P53667 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LIMK1P53667 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LIMK1P53667 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
LIMK1P53667 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.32■□□□□ 0.04
LIMK1P53667 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LIMK1P53667 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.32■□□□□ 0.04
LIMK1P53667 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LIMK1P53667 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LIMK1P53667 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LIMK1P53667 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.32■□□□□ 0.04
LIMK1P53667 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.32■□□□□ 0.04
LIMK1P53667 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.32■□□□□ 0.04
LIMK1P53667 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.32■□□□□ 0.04
LIMK1P53667 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.32■□□□□ 0.04
LIMK1P53667 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.32■□□□□ 0.04
LIMK1P53667 AC008267.1-201ENST00000474858 1069 ntBASIC15.32■□□□□ 0.04
LIMK1P53667 KRT18P25-201ENST00000508931 1278 ntBASIC15.32■□□□□ 0.04
LIMK1P53667 RNA5SP486-201ENST00000515961 83 ntBASIC15.32■□□□□ 0.04
LIMK1P53667 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.32■□□□□ 0.04
LIMK1P53667 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LIMK1P53667 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.32■□□□□ 0.04
LIMK1P53667 AC015910.1-201ENST00000579400 975 ntBASIC15.32■□□□□ 0.04
LIMK1P53667 AL451050.2-201ENST00000606967 682 ntBASIC15.32■□□□□ 0.04
LIMK1P53667 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.32■□□□□ 0.04
LIMK1P53667 AP005019.2-201ENST00000615104 511 ntBASIC15.32■□□□□ 0.04
LIMK1P53667 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LIMK1P53667 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LIMK1P53667 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.32■□□□□ 0.04
LIMK1P53667 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LIMK1P53667 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.32■□□□□ 0.04
LIMK1P53667 AC018735.1-201ENST00000437208 1502 ntBASIC15.32■□□□□ 0.04
LIMK1P53667 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LIMK1P53667 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.32■□□□□ 0.04
LIMK1P53667 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK1P53667 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK1P53667 GGT4P-201ENST00000623672 1708 ntBASIC15.31■□□□□ 0.04
LIMK1P53667 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.31■□□□□ 0.04
LIMK1P53667 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK1P53667 ME2P1-201ENST00000426028 1970 ntBASIC15.31■□□□□ 0.04
LIMK1P53667 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.31■□□□□ 0.04
LIMK1P53667 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK1P53667 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK1P53667 AL645728.1-201ENST00000366221 2101 ntBASIC15.31■□□□□ 0.04
LIMK1P53667 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK1P53667 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK1P53667 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK1P53667 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.31■□□□□ 0.04
LIMK1P53667 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
LIMK1P53667 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK1P53667 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK1P53667 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK1P53667 AC091046.1-201ENST00000331871 207 ntBASIC15.31■□□□□ 0.04
LIMK1P53667 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK1P53667 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.31■□□□□ 0.04
LIMK1P53667 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LIMK1P53667 MIR1202-201ENST00000408529 83 ntBASIC15.31■□□□□ 0.04
LIMK1P53667 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK1P53667 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.31■□□□□ 0.04
LIMK1P53667 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.31■□□□□ 0.04
LIMK1P53667 AC245100.5-201ENST00000452108 331 ntBASIC15.31■□□□□ 0.04
LIMK1P53667 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.31■□□□□ 0.04
LIMK1P53667 COX5BP1-201ENST00000507622 393 ntBASIC15.31■□□□□ 0.04
LIMK1P53667 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.31■□□□□ 0.04
LIMK1P53667 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK1P53667 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms