Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC4P35249 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RFC4P35249 AC022211.2-201ENST00000585075 2527 ntBASIC19.28■□□□□ 0.68
RFC4P35249 AGGF1P2-201ENST00000426656 2106 ntBASIC19.28■□□□□ 0.68
RFC4P35249 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RFC4P35249 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
RFC4P35249 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RFC4P35249 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RFC4P35249 AC079328.2-201ENST00000561241 3354 ntBASIC19.28■□□□□ 0.68
RFC4P35249 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.28■□□□□ 0.68
RFC4P35249 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC4P35249 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.28■□□□□ 0.68
RFC4P35249 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC4P35249 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.28■□□□□ 0.68
RFC4P35249 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RFC4P35249 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC4P35249 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFC4P35249 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC4P35249 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFC4P35249 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.28■□□□□ 0.68
RFC4P35249 GHSR-202ENST00000427970 912 ntBASIC19.28■□□□□ 0.68
RFC4P35249 AC234782.1-201ENST00000451950 919 ntBASIC19.28■□□□□ 0.68
RFC4P35249 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC19.28■□□□□ 0.68
RFC4P35249 CFL1-214ENST00000534769 758 ntTSL 2 BASIC19.28■□□□□ 0.68
RFC4P35249 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC19.28■□□□□ 0.68
RFC4P35249 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.28■□□□□ 0.68
RFC4P35249 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC4P35249 AP000346.4-201ENST00000614827 381 ntBASIC19.28■□□□□ 0.68
RFC4P35249 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RFC4P35249 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.28■□□□□ 0.68
RFC4P35249 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC4P35249 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFC4P35249 AC055811.4-201ENST00000624039 1754 ntBASIC19.28■□□□□ 0.68
RFC4P35249 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.28■□□□□ 0.68
RFC4P35249 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RFC4P35249 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RFC4P35249 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC4P35249 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFC4P35249 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFC4P35249 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFC4P35249 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFC4P35249 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RFC4P35249 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RFC4P35249 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RFC4P35249 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RFC4P35249 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.27■□□□□ 0.68
RFC4P35249 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.27■□□□□ 0.68
RFC4P35249 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RFC4P35249 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 PARVG-202ENST00000415224 999 ntTSL 2 BASIC19.27■□□□□ 0.68
RFC4P35249 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC19.27■□□□□ 0.68
RFC4P35249 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC19.27■□□□□ 0.68
RFC4P35249 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 MIR3147-201ENST00000577811 66 ntBASIC19.27■□□□□ 0.68
RFC4P35249 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 AC018635.2-201ENST00000608625 364 ntBASIC19.27■□□□□ 0.68
RFC4P35249 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.27■□□□□ 0.68
RFC4P35249 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RFC4P35249 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.27■□□□□ 0.68
RFC4P35249 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC19.27■□□□□ 0.68
RFC4P35249 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFC4P35249 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RFC4P35249 AC084364.1-201ENST00000551967 1556 ntBASIC19.27■□□□□ 0.67
RFC4P35249 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.27■□□□□ 0.67
RFC4P35249 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.27■□□□□ 0.67
RFC4P35249 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RFC4P35249 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 AL596087.1-201ENST00000400979 1969 ntBASIC19.26■□□□□ 0.67
RFC4P35249 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RFC4P35249 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RFC4P35249 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.26■□□□□ 0.67
RFC4P35249 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RFC4P35249 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 MARK2P5-201ENST00000507649 634 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms