Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
ATF1P18846 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.71□□□□□ -0.21
ATF1P18846 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 FAM8A3P-201ENST00000427218 844 ntBASIC13.71□□□□□ -0.21
ATF1P18846 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 SPDYE11-202ENST00000450699 704 ntBASIC13.71□□□□□ -0.21
ATF1P18846 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
ATF1P18846 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.71□□□□□ -0.21
ATF1P18846 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.71□□□□□ -0.21
ATF1P18846 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.71□□□□□ -0.21
ATF1P18846 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.71□□□□□ -0.21
ATF1P18846 SPDYE9P-201ENST00000570642 692 ntBASIC13.71□□□□□ -0.21
ATF1P18846 SPDYE10P-202ENST00000612005 668 ntBASIC13.71□□□□□ -0.21
ATF1P18846 SPDYE8P-202ENST00000612377 668 ntBASIC13.71□□□□□ -0.21
ATF1P18846 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
ATF1P18846 AC092902.6-201ENST00000641783 218 ntBASIC13.71□□□□□ -0.21
ATF1P18846 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.71□□□□□ -0.21
ATF1P18846 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
ATF1P18846 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
ATF1P18846 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATF1P18846 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
ATF1P18846 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATF1P18846 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATF1P18846 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATF1P18846 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATF1P18846 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATF1P18846 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATF1P18846 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ATF1P18846 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.71□□□□□ -0.22
ATF1P18846 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.71□□□□□ -0.22
ATF1P18846 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ATF1P18846 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
ATF1P18846 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ATF1P18846 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.7□□□□□ -0.22
ATF1P18846 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.7□□□□□ -0.22
ATF1P18846 INTS4P1-203ENST00000641008 3683 ntBASIC13.7□□□□□ -0.22
ATF1P18846 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.7□□□□□ -0.22
ATF1P18846 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 MIR346-201ENST00000362234 95 ntBASIC13.7□□□□□ -0.22
ATF1P18846 HLA-H-201ENST00000383620 1096 ntBASIC13.7□□□□□ -0.22
ATF1P18846 AC023274.1-201ENST00000418278 595 ntBASIC13.7□□□□□ -0.22
ATF1P18846 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.7□□□□□ -0.22
ATF1P18846 AL139010.1-201ENST00000454878 894 ntBASIC13.7□□□□□ -0.22
ATF1P18846 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.7□□□□□ -0.22
ATF1P18846 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
ATF1P18846 AC243562.1-201ENST00000560672 389 ntBASIC13.7□□□□□ -0.22
ATF1P18846 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.7□□□□□ -0.22
ATF1P18846 AP000842.3-202ENST00000569238 1080 ntBASIC13.7□□□□□ -0.22
ATF1P18846 AL450472.2-201ENST00000603663 1156 ntBASIC13.7□□□□□ -0.22
ATF1P18846 AC026120.1-201ENST00000611536 926 ntBASIC13.7□□□□□ -0.22
ATF1P18846 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
ATF1P18846 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
ATF1P18846 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ATF1P18846 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.7□□□□□ -0.22
ATF1P18846 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
ATF1P18846 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.7□□□□□ -0.22
ATF1P18846 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 BX640514.1-201ENST00000583223 1918 ntBASIC13.7□□□□□ -0.22
ATF1P18846 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ATF1P18846 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ATF1P18846 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 AL136982.4-201ENST00000437689 1740 ntBASIC13.7□□□□□ -0.22
ATF1P18846 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATF1P18846 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
ATF1P18846 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ATF1P18846 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.69□□□□□ -0.22
ATF1P18846 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.69□□□□□ -0.22
ATF1P18846 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.69□□□□□ -0.22
ATF1P18846 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.69□□□□□ -0.22
ATF1P18846 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.69□□□□□ -0.22
ATF1P18846 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.69□□□□□ -0.22
ATF1P18846 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATF1P18846 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ATF1P18846 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms