Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CHD2O14647 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHD2O14647 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD2O14647 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD2O14647 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD2O14647 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC20.97■□□□□ 0.95
CHD2O14647 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD2O14647 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC20.97■□□□□ 0.95
CHD2O14647 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHD2O14647 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
CHD2O14647 DDX5-235ENST00000630471 473 ntTSL 4 BASIC20.97■□□□□ 0.95
CHD2O14647 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD2O14647 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CHD2O14647 TNRC18P3-201ENST00000441896 2691 ntBASIC20.97■□□□□ 0.95
CHD2O14647 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC20.96■□□□□ 0.95
CHD2O14647 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 AC099398.1-201ENST00000567919 2776 ntBASIC20.96■□□□□ 0.95
CHD2O14647 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC20.96■□□□□ 0.95
CHD2O14647 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC20.96■□□□□ 0.95
CHD2O14647 REEP5-205ENST00000504247 480 ntTSL 5 BASIC20.96■□□□□ 0.95
CHD2O14647 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC20.96■□□□□ 0.95
CHD2O14647 C2orf69P1-201ENST00000563532 1093 ntBASIC20.96■□□□□ 0.95
CHD2O14647 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC20.96■□□□□ 0.95
CHD2O14647 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 ZBTB45P1-201ENST00000452761 1456 ntBASIC20.96■□□□□ 0.95
CHD2O14647 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD2O14647 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CHD2O14647 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD2O14647 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD2O14647 IL9RP3-201ENST00000442856 1674 ntBASIC20.95■□□□□ 0.94
CHD2O14647 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD2O14647 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CHD2O14647 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD2O14647 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CHD2O14647 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHD2O14647 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC20.95■□□□□ 0.94
CHD2O14647 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC20.95■□□□□ 0.94
CHD2O14647 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD2O14647 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD2O14647 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD2O14647 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD2O14647 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD2O14647 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CHD2O14647 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD2O14647 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHD2O14647 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHD2O14647 STK26-204ENST00000481105 1835 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD2O14647 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CHD2O14647 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHD2O14647 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.95■□□□□ 0.94
CHD2O14647 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD2O14647 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHD2O14647 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHD2O14647 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CHD2O14647 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD2O14647 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD2O14647 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC20.94■□□□□ 0.94
CHD2O14647 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CHD2O14647 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CHD2O14647 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC20.94■□□□□ 0.94
CHD2O14647 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHD2O14647 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC20.94■□□□□ 0.94
CHD2O14647 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD2O14647 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC20.94■□□□□ 0.94
CHD2O14647 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD2O14647 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC20.94■□□□□ 0.94
CHD2O14647 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD2O14647 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC20.94■□□□□ 0.94
CHD2O14647 AC112504.1-201ENST00000623415 1841 ntBASIC20.94■□□□□ 0.94
CHD2O14647 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD2O14647 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD2O14647 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD2O14647 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD2O14647 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.94■□□□□ 0.94
CHD2O14647 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD2O14647 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD2O14647 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC20.94■□□□□ 0.94
CHD2O14647 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.94■□□□□ 0.94
CHD2O14647 MBP-201ENST00000354542 575 ntTSL 2 BASIC20.94■□□□□ 0.94
CHD2O14647 PSMD4P1-201ENST00000433951 1109 ntBASIC20.94■□□□□ 0.94
CHD2O14647 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD2O14647 BUD31-205ENST00000456893 512 ntTSL 5 BASIC20.94■□□□□ 0.94
CHD2O14647 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD2O14647 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC20.94■□□□□ 0.94
CHD2O14647 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CHD2O14647 AC133540.1-201ENST00000620845 1019 ntBASIC20.94■□□□□ 0.94
CHD2O14647 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms