Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 MIR658-201ENST00000385210 100 ntBASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 AC079776.1-201ENST00000401540 1152 ntBASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 MIR1909-201ENST00000411312 80 ntBASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 AC007389.4-201ENST00000454674 793 ntBASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 AC106886.1-201ENST00000568660 600 ntBASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 MIR6805-201ENST00000615055 62 ntBASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
NPIPA1Q9UND3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 TMEM14DP-201ENST00000422205 345 ntBASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 RN7SL399P-201ENST00000471648 279 ntBASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 AC092552.1-201ENST00000547243 906 ntBASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 AC036164.1-201ENST00000570544 333 ntBASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 MYO15B-237ENST00000642007 4893 ntBASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms