Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC17.54■□□□□ 0.4
TPM4P67936 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM4P67936 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPM4P67936 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM4P67936 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.53■□□□□ 0.4
TPM4P67936 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM4P67936 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.53■□□□□ 0.4
TPM4P67936 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM4P67936 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TPM4P67936 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM4P67936 AC002056.1-201ENST00000395613 760 ntBASIC17.53■□□□□ 0.4
TPM4P67936 RPL5P21-201ENST00000404620 815 ntBASIC17.53■□□□□ 0.4
TPM4P67936 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.53■□□□□ 0.4
TPM4P67936 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.53■□□□□ 0.4
TPM4P67936 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.53■□□□□ 0.4
TPM4P67936 EMBP1-201ENST00000458200 901 ntBASIC17.53■□□□□ 0.4
TPM4P67936 RNA5SP410-201ENST00000516285 106 ntBASIC17.53■□□□□ 0.4
TPM4P67936 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TPM4P67936 AL031008.1-201ENST00000619963 541 ntBASIC17.53■□□□□ 0.4
TPM4P67936 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TPM4P67936 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM4P67936 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TPM4P67936 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPM4P67936 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.53■□□□□ 0.4
TPM4P67936 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM4P67936 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM4P67936 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TPM4P67936 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.53■□□□□ 0.4
TPM4P67936 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.53■□□□□ 0.4
TPM4P67936 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TPM4P67936 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM4P67936 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TPM4P67936 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPM4P67936 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.53■□□□□ 0.4
TPM4P67936 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.52■□□□□ 0.4
TPM4P67936 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM4P67936 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
TPM4P67936 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TPM4P67936 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM4P67936 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.52■□□□□ 0.4
TPM4P67936 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM4P67936 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.52■□□□□ 0.4
TPM4P67936 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM4P67936 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TPM4P67936 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.52■□□□□ 0.4
TPM4P67936 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM4P67936 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM4P67936 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
TPM4P67936 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TPM4P67936 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM4P67936 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.52■□□□□ 0.4
TPM4P67936 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TPM4P67936 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.52■□□□□ 0.4
TPM4P67936 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TPM4P67936 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.52■□□□□ 0.4
TPM4P67936 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.52■□□□□ 0.4
TPM4P67936 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.52■□□□□ 0.4
TPM4P67936 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.52■□□□□ 0.4
TPM4P67936 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.52■□□□□ 0.4
TPM4P67936 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.52■□□□□ 0.4
TPM4P67936 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.52■□□□□ 0.4
TPM4P67936 AC004877.2-201ENST00000623941 599 ntBASIC17.52■□□□□ 0.4
TPM4P67936 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.52■□□□□ 0.4
TPM4P67936 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TPM4P67936 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM4P67936 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.52■□□□□ 0.39
TPM4P67936 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TPM4P67936 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TPM4P67936 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TPM4P67936 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TPM4P67936 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TPM4P67936 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TPM4P67936 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TPM4P67936 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.52■□□□□ 0.39
TPM4P67936 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TPM4P67936 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TPM4P67936 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.51■□□□□ 0.39
TPM4P67936 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TPM4P67936 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.51■□□□□ 0.39
TPM4P67936 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TPM4P67936 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.51■□□□□ 0.39
TPM4P67936 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM4P67936 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM4P67936 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM4P67936 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.51■□□□□ 0.39
TPM4P67936 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
TPM4P67936 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM4P67936 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM4P67936 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM4P67936 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM4P67936 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM4P67936 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TPM4P67936 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TPM4P67936 AL139010.1-201ENST00000454878 894 ntBASIC17.51■□□□□ 0.39
TPM4P67936 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.51■□□□□ 0.39
TPM4P67936 UNC93B7-201ENST00000509439 705 ntBASIC17.51■□□□□ 0.39
TPM4P67936 RNA5SP415-201ENST00000517246 115 ntBASIC17.51■□□□□ 0.39
TPM4P67936 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.51■□□□□ 0.39
TPM4P67936 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.51■□□□□ 0.39
TPM4P67936 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms