Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.95■□□□□ 0.62
NUP98P52948 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.95■□□□□ 0.62
NUP98P52948 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
NUP98P52948 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.95■□□□□ 0.62
NUP98P52948 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUP98P52948 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUP98P52948 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.94■□□□□ 0.62
NUP98P52948 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NUP98P52948 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.94■□□□□ 0.62
NUP98P52948 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NUP98P52948 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.94■□□□□ 0.62
NUP98P52948 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NUP98P52948 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.94■□□□□ 0.62
NUP98P52948 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.94■□□□□ 0.62
NUP98P52948 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
NUP98P52948 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC18.94■□□□□ 0.62
NUP98P52948 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.94■□□□□ 0.62
NUP98P52948 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
NUP98P52948 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC18.94■□□□□ 0.62
NUP98P52948 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
NUP98P52948 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.94■□□□□ 0.62
NUP98P52948 AC244452.3-201ENST00000636814 210 ntBASIC18.94■□□□□ 0.62
NUP98P52948 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
NUP98P52948 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.94■□□□□ 0.62
NUP98P52948 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP98P52948 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
NUP98P52948 AP000845.1-201ENST00000581677 2131 ntBASIC18.93■□□□□ 0.62
NUP98P52948 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUP98P52948 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
NUP98P52948 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUP98P52948 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC18.93■□□□□ 0.62
NUP98P52948 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.93■□□□□ 0.62
NUP98P52948 OARD1-204ENST00000464633 717 ntTSL 2 BASIC18.93■□□□□ 0.62
NUP98P52948 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.93■□□□□ 0.62
NUP98P52948 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
NUP98P52948 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.93■□□□□ 0.62
NUP98P52948 CDK7-214ENST00000626796 358 ntTSL 5 BASIC18.93■□□□□ 0.62
NUP98P52948 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC18.93■□□□□ 0.62
NUP98P52948 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUP98P52948 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.93■□□□□ 0.62
NUP98P52948 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUP98P52948 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUP98P52948 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
NUP98P52948 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUP98P52948 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUP98P52948 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUP98P52948 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUP98P52948 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NUP98P52948 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NUP98P52948 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.93■□□□□ 0.62
NUP98P52948 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.93■□□□□ 0.62
NUP98P52948 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUP98P52948 AC079328.1-201ENST00000560358 952 ntBASIC18.93■□□□□ 0.62
NUP98P52948 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.93■□□□□ 0.62
NUP98P52948 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.92■□□□□ 0.62
NUP98P52948 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.92■□□□□ 0.62
NUP98P52948 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.92■□□□□ 0.62
NUP98P52948 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 LTB4R2-202ENST00000528054 3092 ntBASIC18.92■□□□□ 0.62
NUP98P52948 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
NUP98P52948 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.92■□□□□ 0.62
NUP98P52948 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.92■□□□□ 0.62
NUP98P52948 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
NUP98P52948 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 RN7SKP230-201ENST00000365642 335 ntBASIC18.92■□□□□ 0.62
NUP98P52948 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC18.92■□□□□ 0.62
NUP98P52948 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 EEF1DP6-201ENST00000449232 372 ntBASIC18.92■□□□□ 0.62
NUP98P52948 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.92■□□□□ 0.62
NUP98P52948 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.92■□□□□ 0.62
NUP98P52948 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
NUP98P52948 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUP98P52948 AC009779.1-201ENST00000551138 283 ntBASIC18.92■□□□□ 0.62
NUP98P52948 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms