Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.16□□□□□ -0.3
COL8A2P25067 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
COL8A2P25067 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.16□□□□□ -0.3
COL8A2P25067 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
COL8A2P25067 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
COL8A2P25067 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
COL8A2P25067 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.16□□□□□ -0.3
COL8A2P25067 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
COL8A2P25067 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.15□□□□□ -0.3
COL8A2P25067 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.15□□□□□ -0.3
COL8A2P25067 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
COL8A2P25067 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
COL8A2P25067 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
COL8A2P25067 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
COL8A2P25067 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.15□□□□□ -0.3
COL8A2P25067 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
COL8A2P25067 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
COL8A2P25067 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.15□□□□□ -0.3
COL8A2P25067 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.15□□□□□ -0.3
COL8A2P25067 AL133267.1-201ENST00000398220 340 ntBASIC13.15□□□□□ -0.3
COL8A2P25067 C1QBPP1-201ENST00000400117 770 ntBASIC13.15□□□□□ -0.3
COL8A2P25067 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.15□□□□□ -0.3
COL8A2P25067 ACTG1P3-201ENST00000431775 1114 ntBASIC13.15□□□□□ -0.3
COL8A2P25067 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.15□□□□□ -0.3
COL8A2P25067 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.15□□□□□ -0.3
COL8A2P25067 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.15□□□□□ -0.3
COL8A2P25067 SLC25A47P1-201ENST00000531577 414 ntBASIC13.15□□□□□ -0.3
COL8A2P25067 TDH-203ENST00000531764 1110 ntBASIC13.15□□□□□ -0.3
COL8A2P25067 ENPP7P5-201ENST00000541031 1031 ntBASIC13.15□□□□□ -0.3
COL8A2P25067 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.15□□□□□ -0.3
COL8A2P25067 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.15□□□□□ -0.3
COL8A2P25067 AC120045.2-201ENST00000567334 178 ntBASIC13.15□□□□□ -0.3
COL8A2P25067 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.15□□□□□ -0.3
COL8A2P25067 AC124283.3-201ENST00000570869 594 ntBASIC13.15□□□□□ -0.3
COL8A2P25067 BTNL10-201ENST00000595971 695 ntBASIC13.15□□□□□ -0.3
COL8A2P25067 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.15□□□□□ -0.3
COL8A2P25067 AL512343.1-201ENST00000605837 169 ntBASIC13.15□□□□□ -0.3
COL8A2P25067 AC017083.2-201ENST00000608069 979 ntBASIC13.15□□□□□ -0.3
COL8A2P25067 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.15□□□□□ -0.3
COL8A2P25067 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
COL8A2P25067 AL136379.1-201ENST00000623471 2642 ntBASIC13.15□□□□□ -0.3
COL8A2P25067 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
COL8A2P25067 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.15□□□□□ -0.3
COL8A2P25067 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
COL8A2P25067 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COL8A2P25067 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.15□□□□□ -0.31
COL8A2P25067 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.15□□□□□ -0.31
COL8A2P25067 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.14□□□□□ -0.31
COL8A2P25067 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
COL8A2P25067 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.14□□□□□ -0.31
COL8A2P25067 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.14□□□□□ -0.31
COL8A2P25067 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
COL8A2P25067 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
COL8A2P25067 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL8A2P25067 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms