Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 LINC00528-201ENST00000600723 2160 ntBASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
LINC00959A0A1B0GUT2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 WASH3P-207ENST00000560956 1394 ntBASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 FO538757.1-201ENST00000623083 1397 ntBASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 FGD5P1-202ENST00000614866 2498 ntBASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 AC007686.3-201ENST00000619017 3487 ntBASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 ABR-205ENST00000544583 5595 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 FO393414.2-201ENST00000405153 598 ntBASIC10.65□□□□□ -0.7
LINC00959A0A1B0GUT2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms