Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 KLF2P3-201ENST00000451977 1087 ntBASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 MIR6069-201ENST00000620069 79 ntBASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 TUBB3P1-201ENST00000405796 1332 ntBASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00474Q9P2X8 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 BAD-202ENST00000394531 631 ntTSL 3 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 AC107890.1-201ENST00000422478 521 ntBASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 GPS2P2-201ENST00000430745 888 ntBASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 HLA-V-204ENST00000476601 1289 ntBASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 AC069120.2-201ENST00000524091 540 ntBASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 BAD-207ENST00000544785 525 ntTSL 3 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 AC140878.1-201ENST00000565277 250 ntBASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 AC027612.4-201ENST00000605371 583 ntBASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 RN7SL828P-201ENST00000607615 303 ntBASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 AL589739.1-201ENST00000607720 493 ntBASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00474Q9P2X8 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms