Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 AL136379.1-201ENST00000623471 2642 ntBASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 AL139400.1-201ENST00000366220 510 ntBASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 RPL37AP1-201ENST00000412502 279 ntBASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 SPDYE7P-202ENST00000420373 878 ntBASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 BCRP1-201ENST00000444246 691 ntBASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 LINC00628-201ENST00000628516 1289 ntBASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 AC084364.1-201ENST00000551967 1556 ntBASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.63■□□□□ 0.57
UPF3BQ9BZI7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 CICP23-201ENST00000605013 2741 ntBASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 AL512356.2-201ENST00000546955 174 ntBASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 AC190387.1-201ENST00000551683 408 ntBASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF3BQ9BZI7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 AC063926.3-201ENST00000624734 5658 ntBASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.61■□□□□ 0.57
UPF3BQ9BZI7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms