Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 AC139749.1-202ENST00000617529 3139 ntBASIC12.9□□□□□ -0.34
SRPXP78539 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.9□□□□□ -0.34
SRPXP78539 VN2R19P-201ENST00000442399 1052 ntBASIC12.9□□□□□ -0.34
SRPXP78539 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.9□□□□□ -0.34
SRPXP78539 AF238378.1-201ENST00000526806 358 ntBASIC12.9□□□□□ -0.34
SRPXP78539 PRELID1P1-202ENST00000567272 903 ntBASIC12.9□□□□□ -0.34
SRPXP78539 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.9□□□□□ -0.34
SRPXP78539 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.9□□□□□ -0.34
SRPXP78539 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.9□□□□□ -0.34
SRPXP78539 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.9□□□□□ -0.34
SRPXP78539 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.9□□□□□ -0.34
SRPXP78539 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SRPXP78539 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.9□□□□□ -0.34
SRPXP78539 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SRPXP78539 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SRPXP78539 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SRPXP78539 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
SRPXP78539 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
SRPXP78539 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 DMBT1P1-203ENST00000636837 4628 ntBASIC12.89□□□□□ -0.35
SRPXP78539 KRT8P37-201ENST00000451609 1420 ntBASIC12.89□□□□□ -0.35
SRPXP78539 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
SRPXP78539 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SRPXP78539 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SRPXP78539 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SRPXP78539 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SRPXP78539 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.89□□□□□ -0.35
SRPXP78539 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
SRPXP78539 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
SRPXP78539 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.89□□□□□ -0.35
SRPXP78539 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SRPXP78539 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.89□□□□□ -0.35
SRPXP78539 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SRPXP78539 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
SRPXP78539 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.89□□□□□ -0.35
SRPXP78539 AC096734.2-201ENST00000562054 433 ntBASIC12.89□□□□□ -0.35
SRPXP78539 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.89□□□□□ -0.35
SRPXP78539 AC023141.13-201ENST00000604991 943 ntBASIC12.89□□□□□ -0.35
SRPXP78539 SPTSSB-204ENST00000617024 1292 ntBASIC12.89□□□□□ -0.35
SRPXP78539 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.89□□□□□ -0.35
SRPXP78539 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.89□□□□□ -0.35
SRPXP78539 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.89□□□□□ -0.35
SRPXP78539 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SRPXP78539 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.89□□□□□ -0.35
SRPXP78539 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.89□□□□□ -0.35
SRPXP78539 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRPXP78539 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
SRPXP78539 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SRPXP78539 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRPXP78539 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.88□□□□□ -0.35
SRPXP78539 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SRPXP78539 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRPXP78539 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRPXP78539 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SRPXP78539 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms