Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 AL135999.2-201ENST00000622438 1686 ntBASIC12.22□□□□□ -0.45
RAB5BP61020 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
RAB5BP61020 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.22□□□□□ -0.45
RAB5BP61020 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.22□□□□□ -0.45
RAB5BP61020 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RAB5BP61020 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
RAB5BP61020 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 AC068760.1-201ENST00000493579 1953 ntBASIC12.21□□□□□ -0.45
RAB5BP61020 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB5BP61020 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.21□□□□□ -0.45
RAB5BP61020 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.21□□□□□ -0.45
RAB5BP61020 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RAB5BP61020 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB5BP61020 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RAB5BP61020 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB5BP61020 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.21□□□□□ -0.45
RAB5BP61020 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.21□□□□□ -0.45
RAB5BP61020 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RAB5BP61020 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RAB5BP61020 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB5BP61020 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RAB5BP61020 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.21□□□□□ -0.45
RAB5BP61020 COX5BP2-201ENST00000392354 334 ntBASIC12.21□□□□□ -0.45
RAB5BP61020 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.21□□□□□ -0.45
RAB5BP61020 AC096633.1-201ENST00000422446 749 ntBASIC12.21□□□□□ -0.45
RAB5BP61020 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RAB5BP61020 NCF1B-203ENST00000435988 1254 ntBASIC12.21□□□□□ -0.45
RAB5BP61020 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.21□□□□□ -0.45
RAB5BP61020 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.21□□□□□ -0.45
RAB5BP61020 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC12.21□□□□□ -0.45
RAB5BP61020 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 AC109462.3-201ENST00000573934 613 ntBASIC12.21□□□□□ -0.45
RAB5BP61020 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC12.21□□□□□ -0.45
RAB5BP61020 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB5BP61020 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.21□□□□□ -0.45
RAB5BP61020 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.21□□□□□ -0.45
RAB5BP61020 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
RAB5BP61020 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB5BP61020 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB5BP61020 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB5BP61020 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.21□□□□□ -0.46
RAB5BP61020 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB5BP61020 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
RAB5BP61020 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.21□□□□□ -0.46
RAB5BP61020 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.21□□□□□ -0.46
RAB5BP61020 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
RAB5BP61020 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RAB5BP61020 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
RAB5BP61020 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB5BP61020 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB5BP61020 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB5BP61020 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RAB5BP61020 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB5BP61020 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
RAB5BP61020 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB5BP61020 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.21□□□□□ -0.46
RAB5BP61020 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB5BP61020 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB5BP61020 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.2□□□□□ -0.46
RAB5BP61020 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms