Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.81□□□□□ -0.04
CASP9P55211 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.81□□□□□ -0.04
CASP9P55211 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CASP9P55211 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.81□□□□□ -0.04
CASP9P55211 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.81□□□□□ -0.04
CASP9P55211 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.81□□□□□ -0.04
CASP9P55211 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.81□□□□□ -0.04
CASP9P55211 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.81□□□□□ -0.04
CASP9P55211 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.81□□□□□ -0.04
CASP9P55211 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.81□□□□□ -0.04
CASP9P55211 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.81□□□□□ -0.04
CASP9P55211 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.81□□□□□ -0.04
CASP9P55211 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.81□□□□□ -0.04
CASP9P55211 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.81□□□□□ -0.04
CASP9P55211 AC018529.1-201ENST00000613063 361 ntBASIC14.81□□□□□ -0.04
CASP9P55211 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.81□□□□□ -0.04
CASP9P55211 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.81□□□□□ -0.04
CASP9P55211 AC023024.2-201ENST00000623561 1993 ntBASIC14.81□□□□□ -0.04
CASP9P55211 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.81□□□□□ -0.04
CASP9P55211 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CASP9P55211 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.81□□□□□ -0.04
CASP9P55211 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP9P55211 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
CASP9P55211 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.8□□□□□ -0.04
CASP9P55211 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.8□□□□□ -0.04
CASP9P55211 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CASP9P55211 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CASP9P55211 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.8□□□□□ -0.04
CASP9P55211 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CASP9P55211 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
CASP9P55211 AL353705.2-201ENST00000428243 662 ntBASIC14.8□□□□□ -0.04
CASP9P55211 GPS2P2-201ENST00000430745 888 ntBASIC14.8□□□□□ -0.04
CASP9P55211 MTND6P24-201ENST00000440466 518 ntBASIC14.8□□□□□ -0.04
CASP9P55211 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.8□□□□□ -0.04
CASP9P55211 AC055717.3-201ENST00000622967 595 ntBASIC14.8□□□□□ -0.04
CASP9P55211 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
CASP9P55211 AC148477.4-201ENST00000613430 1793 ntBASIC14.8□□□□□ -0.04
CASP9P55211 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 AGAP7P-201ENST00000582299 2062 ntBASIC14.8□□□□□ -0.04
CASP9P55211 AGAP14-201ENST00000624701 2060 ntBASIC14.8□□□□□ -0.04
CASP9P55211 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CASP9P55211 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.8□□□□□ -0.04
CASP9P55211 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP9P55211 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.8□□□□□ -0.04
CASP9P55211 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CASP9P55211 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CASP9P55211 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CASP9P55211 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CASP9P55211 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CASP9P55211 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CASP9P55211 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CASP9P55211 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CASP9P55211 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CASP9P55211 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CASP9P55211 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CASP9P55211 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CASP9P55211 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.79□□□□□ -0.04
CASP9P55211 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CASP9P55211 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.79□□□□□ -0.04
CASP9P55211 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
CASP9P55211 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.79□□□□□ -0.04
CASP9P55211 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms