Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC9.98□□□□□ -0.81
UBE2AP49459 PTPRVP-205ENST00000641549 5067 ntBASIC9.98□□□□□ -0.81
UBE2AP49459 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2AP49459 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
UBE2AP49459 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2AP49459 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
UBE2AP49459 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC9.98□□□□□ -0.81
UBE2AP49459 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC9.98□□□□□ -0.81
UBE2AP49459 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC9.98□□□□□ -0.81
UBE2AP49459 AC104640.1-201ENST00000562617 2109 ntBASIC9.98□□□□□ -0.81
UBE2AP49459 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2AP49459 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC9.98□□□□□ -0.81
UBE2AP49459 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2AP49459 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
UBE2AP49459 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2AP49459 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
UBE2AP49459 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2AP49459 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2AP49459 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2AP49459 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC9.98□□□□□ -0.81
UBE2AP49459 FES-204ENST00000414248 2327 ntTSL 2 BASIC9.98□□□□□ -0.81
UBE2AP49459 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 UXT-AS1-201ENST00000590504 1525 ntBASIC9.97□□□□□ -0.81
UBE2AP49459 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC9.97□□□□□ -0.81
UBE2AP49459 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC9.97□□□□□ -0.81
UBE2AP49459 AC092384.3-202ENST00000564646 2873 ntBASIC9.97□□□□□ -0.81
UBE2AP49459 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 HLA-DQB2-231ENST00000435145 2026 ntBASIC9.97□□□□□ -0.81
UBE2AP49459 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2AP49459 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2AP49459 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC9.97□□□□□ -0.81
UBE2AP49459 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC9.97□□□□□ -0.81
UBE2AP49459 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
UBE2AP49459 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC9.97□□□□□ -0.81
UBE2AP49459 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2AP49459 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2AP49459 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
UBE2AP49459 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC9.97□□□□□ -0.81
UBE2AP49459 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
UBE2AP49459 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC9.97□□□□□ -0.81
UBE2AP49459 GATB-205ENST00000508611 605 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2AP49459 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2AP49459 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
UBE2AP49459 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC9.97□□□□□ -0.81
UBE2AP49459 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC9.97□□□□□ -0.81
UBE2AP49459 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC9.97□□□□□ -0.81
UBE2AP49459 AC099522.2-201ENST00000607001 744 ntBASIC9.97□□□□□ -0.81
UBE2AP49459 AC026120.1-201ENST00000611536 926 ntBASIC9.97□□□□□ -0.81
UBE2AP49459 NME4-212ENST00000621774 904 ntTSL 3 BASIC9.97□□□□□ -0.81
UBE2AP49459 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
UBE2AP49459 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2AP49459 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC9.97□□□□□ -0.81
UBE2AP49459 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2AP49459 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
UBE2AP49459 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC9.97□□□□□ -0.81
UBE2AP49459 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2AP49459 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
UBE2AP49459 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2AP49459 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms