Protein–RNA interactions for Protein: P16452

EPB42, Erythrocyte membrane protein band 4.2, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42P16452 AC148477.4-201ENST00000613430 1793 ntBASIC15.24■□□□□ 0.03
EPB42P16452 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPB42P16452 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPB42P16452 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.23■□□□□ 0.03
EPB42P16452 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.23■□□□□ 0.03
EPB42P16452 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.23■□□□□ 0.03
EPB42P16452 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
EPB42P16452 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.23■□□□□ 0.03
EPB42P16452 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.23■□□□□ 0.03
EPB42P16452 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 RPL5P21-201ENST00000404620 815 ntBASIC15.23■□□□□ 0.03
EPB42P16452 TSEN15P1-201ENST00000423257 515 ntBASIC15.23■□□□□ 0.03
EPB42P16452 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.23■□□□□ 0.03
EPB42P16452 SERPINA7P1-201ENST00000443077 631 ntBASIC15.23■□□□□ 0.03
EPB42P16452 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.23■□□□□ 0.03
EPB42P16452 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 AC109322.1-201ENST00000524499 1264 ntBASIC15.23■□□□□ 0.03
EPB42P16452 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.23■□□□□ 0.03
EPB42P16452 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.23■□□□□ 0.03
EPB42P16452 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.23■□□□□ 0.03
EPB42P16452 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.23■□□□□ 0.03
EPB42P16452 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.23■□□□□ 0.03
EPB42P16452 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.23■□□□□ 0.03
EPB42P16452 AL033527.5-202ENST00000641632 1098 ntBASIC15.23■□□□□ 0.03
EPB42P16452 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.23■□□□□ 0.03
EPB42P16452 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.23■□□□□ 0.03
EPB42P16452 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.23■□□□□ 0.03
EPB42P16452 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.23■□□□□ 0.03
EPB42P16452 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.23■□□□□ 0.03
EPB42P16452 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
EPB42P16452 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
EPB42P16452 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPB42P16452 TNRC18P2-201ENST00000417666 2714 ntBASIC15.23■□□□□ 0.03
EPB42P16452 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
EPB42P16452 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
EPB42P16452 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.22■□□□□ 0.03
EPB42P16452 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EPB42P16452 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPB42P16452 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPB42P16452 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
EPB42P16452 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPB42P16452 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.22■□□□□ 0.03
EPB42P16452 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPB42P16452 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
EPB42P16452 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPB42P16452 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPB42P16452 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
EPB42P16452 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPB42P16452 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
EPB42P16452 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
EPB42P16452 RPL37AP1-201ENST00000412502 279 ntBASIC15.22■□□□□ 0.03
EPB42P16452 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EPB42P16452 CNN2P2-201ENST00000443536 909 ntBASIC15.22■□□□□ 0.03
EPB42P16452 CNN2P3-201ENST00000450201 906 ntBASIC15.22■□□□□ 0.03
EPB42P16452 HLA-V-204ENST00000476601 1289 ntBASIC15.22■□□□□ 0.03
EPB42P16452 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.22■□□□□ 0.03
EPB42P16452 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EPB42P16452 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.22■□□□□ 0.03
EPB42P16452 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.22■□□□□ 0.03
EPB42P16452 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.22■□□□□ 0.03
EPB42P16452 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.22■□□□□ 0.03
EPB42P16452 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPB42P16452 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.22■□□□□ 0.03
EPB42P16452 AL136317.3-201ENST00000618497 906 ntBASIC15.22■□□□□ 0.03
EPB42P16452 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
EPB42P16452 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.22■□□□□ 0.03
EPB42P16452 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.22■□□□□ 0.03
EPB42P16452 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPB42P16452 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.22■□□□□ 0.03
EPB42P16452 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
EPB42P16452 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPB42P16452 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPB42P16452 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPB42P16452 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms