Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN5O00501 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLDN5O00501 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN5O00501 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN5O00501 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN5O00501 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN5O00501 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN5O00501 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLDN5O00501 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN5O00501 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN5O00501 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN5O00501 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN5O00501 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN5O00501 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN5O00501 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN5O00501 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN5O00501 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN5O00501 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN5O00501 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 AP001582.1-201ENST00000525856 295 ntBASIC16.38■□□□□ 0.21
CLDN5O00501 MIR5189-201ENST00000577370 114 ntBASIC16.38■□□□□ 0.21
CLDN5O00501 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN5O00501 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN5O00501 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN5O00501 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN5O00501 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLDN5O00501 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN5O00501 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN5O00501 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN5O00501 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN5O00501 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN5O00501 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN5O00501 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN5O00501 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CLDN5O00501 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
CLDN5O00501 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN5O00501 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 AC087481.3-201ENST00000602886 1894 ntBASIC16.37■□□□□ 0.21
CLDN5O00501 CICP11-201ENST00000434745 2827 ntBASIC16.37■□□□□ 0.21
CLDN5O00501 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
CLDN5O00501 AL138799.1-201ENST00000448213 1675 ntBASIC16.37■□□□□ 0.21
CLDN5O00501 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CLDN5O00501 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN5O00501 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN5O00501 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN5O00501 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN5O00501 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN5O00501 TDH-203ENST00000531764 1110 ntBASIC16.37■□□□□ 0.21
CLDN5O00501 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN5O00501 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN5O00501 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN5O00501 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN5O00501 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.37■□□□□ 0.21
CLDN5O00501 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.37■□□□□ 0.21
CLDN5O00501 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.37■□□□□ 0.21
CLDN5O00501 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN5O00501 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN5O00501 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN5O00501 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLDN5O00501 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CLDN5O00501 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN5O00501 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms