Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 TIAM2-212ENST00000529824 5262 ntTSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 RNF165-201ENST00000269439 7596 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 AC112504.1-201ENST00000623415 1841 ntBASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 F2R-202ENST00000505600 442 ntTSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 AC008687.6-201ENST00000596318 630 ntBASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 PARP1-210ENST00000629232 477 ntTSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 ZEB1-AS1-208ENST00000607166 2503 ntBASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 COL14A1-203ENST00000309791 6163 ntTSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 BTBD11-202ENST00000357167 4107 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 AC105206.1-202ENST00000314927 2368 ntBASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 LPO-204ENST00000543544 2350 ntTSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
CHKB-CPT1BH3BT56 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 IGSF3-203ENST00000369486 7254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 EPB42-201ENST00000300215 4553 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 AL358933.1-201ENST00000565046 2830 ntBASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms