RNA–Protein interactions for RNA: ENST00000300215.7

EPB42-201, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 4,553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-201ENST00000300215 NISCHQ9Y2I1 1504 aa19.92■□□□□ 0.78
EPB42-201ENST00000300215 DCAF8L2P0C7V8 631 aa19.66■□□□□ 0.74
EPB42-201ENST00000300215 SUPT5HO00267 1087 aaKnown RBP18.79■□□□□ 0.6
EPB42-201ENST00000300215 SHROOM4Q9ULL8 1493 aa18.59■□□□□ 0.57
EPB42-201ENST00000300215 EHMT2Q96KQ7 1210 aa18.4■□□□□ 0.54
EPB42-201ENST00000300215 PELP1Q8IZL8 1130 aaKnown RBP17.99■□□□□ 0.47
EPB42-201ENST00000300215 FAM9AQ8IZU1 332 aaPredicted RBP17.81■□□□□ 0.44
EPB42-201ENST00000300215 APLP2Q06481 763 aa17.81■□□□□ 0.44
EPB42-201ENST00000300215 TTBK1Q5TCY1 1321 aaPredicted RBP17.79■□□□□ 0.44
EPB42-201ENST00000300215 PCGF6Q9BYE7 350 aa17.76■□□□□ 0.43
EPB42-201ENST00000300215 RANGAP1P46060 587 aaPredicted RBP17.47■□□□□ 0.39
EPB42-201ENST00000300215 CENPBP07199 599 aaPredicted RBP17.42■□□□□ 0.38
EPB42-201ENST00000300215 CCER1Q8TC90 406 aaPredicted RBP17.37■□□□□ 0.37
EPB42-201ENST00000300215 ERICH6Q7L0X2 663 aa17.36■□□□□ 0.37
EPB42-201ENST00000300215 TRIM41Q8WV44 630 aa17.25■□□□□ 0.35
EPB42-201ENST00000300215 ATP1B4Q9UN42 357 aaPredicted RBP17.24■□□□□ 0.35
EPB42-201ENST00000300215 ZEB1P37275 1124 aaPredicted RBP17.23■□□□□ 0.35
EPB42-201ENST00000300215 YTHDC1Q96MU7 727 aaKnown RBP17.19■□□□□ 0.34
EPB42-201ENST00000300215 UBTFP17480 764 aaKnown RBP17.13■□□□□ 0.33
EPB42-201ENST00000300215 PPARGC1BQ86YN6 1023 aaKnown RBP17.08■□□□□ 0.33
EPB42-201ENST00000300215 NEFLP07196 543 aa17.06■□□□□ 0.32
EPB42-201ENST00000300215 CHIC1Q5VXU3 224 aa16.93■□□□□ 0.3
EPB42-201ENST00000300215 ABCC9O60706 1549 aa16.9■□□□□ 0.3
EPB42-201ENST00000300215 LOC105371045A0A1W2PR82 267 aa16.84■□□□□ 0.29
EPB42-201ENST00000300215 MYT1Q01538 1121 aa16.76■□□□□ 0.27
EPB42-201ENST00000300215 TRIM26Q12899 539 aaPredicted RBP16.76■□□□□ 0.27
EPB42-201ENST00000300215 HRCP23327 699 aa16.75■□□□□ 0.27
EPB42-201ENST00000300215 ITGAEP38570 1179 aa16.75■□□□□ 0.27
EPB42-201ENST00000300215 POLR3GLQ9BT43 218 aa16.69■□□□□ 0.26
EPB42-201ENST00000300215 CNGB1Q14028 1251 aaPredicted RBP16.67■□□□□ 0.26
EPB42-201ENST00000300215 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
EPB42-201ENST00000300215 HNRNPUL2Q1KMD3 747 aaKnown RBP16.62■□□□□ 0.25
EPB42-201ENST00000300215 DAXXQ9UER7 740 aaPredicted RBP16.58■□□□□ 0.25
EPB42-201ENST00000300215 ZCCHC6Q5VYS8 1495 aaKnown RBP16.57■□□□□ 0.24
EPB42-201ENST00000300215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.54■□□□□ 0.24
EPB42-201ENST00000300215 MYT1LQ9UL68 1186 aa16.5■□□□□ 0.23
EPB42-201ENST00000300215 CCDC180Q9P1Z9 1646 aa16.36■□□□□ 0.21
EPB42-201ENST00000300215 DIEXFQ68CQ4 756 aaKnown RBP16.35■□□□□ 0.21
EPB42-201ENST00000300215 SCRIBQ14160 1630 aa16.32■□□□□ 0.2
EPB42-201ENST00000300215 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
EPB42-201ENST00000300215 CLSPNQ9HAW4 1339 aa16.27■□□□□ 0.19
EPB42-201ENST00000300215 RTL5Q5HYW3 569 aaPredicted RBP16.25■□□□□ 0.19
EPB42-201ENST00000300215 BCANQ96GW7 911 aa16.21■□□□□ 0.18
EPB42-201ENST00000300215 ZNF316A6NFI3 1004 aaPredicted RBP16.18■□□□□ 0.18
EPB42-201ENST00000300215 FAM50AQ14320 339 aaKnown RBP16.16■□□□□ 0.18
EPB42-201ENST00000300215 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
EPB42-201ENST00000300215 NEUROD1Q13562 356 aa16.13■□□□□ 0.17
EPB42-201ENST00000300215 TRIM52Q96A61 297 aa16.08■□□□□ 0.17
EPB42-201ENST00000300215 ZNF326Q5BKZ1 582 aaKnown RBP16.02■□□□□ 0.16
EPB42-201ENST00000300215 CSRNP3Q8WYN3 585 aa15.95■□□□□ 0.14
EPB42-201ENST00000300215 ANP32CO43423 234 aa15.95■□□□□ 0.14
EPB42-201ENST00000300215 RSF1Q96T23 1441 aaPredicted RBP15.95■□□□□ 0.14
EPB42-201ENST00000300215 BCL11AQ9H165 835 aa15.94■□□□□ 0.14
EPB42-201ENST00000300215 MYO15BQ96JP2 1530 aa15.93■□□□□ 0.14
EPB42-201ENST00000300215 CDK11AQ9UQ88 783 aaPredicted RBP15.92■□□□□ 0.14
EPB42-201ENST00000300215 ZBTB47Q9UFB7 747 aaPredicted RBP15.81■□□□□ 0.12
EPB42-201ENST00000300215 RB1CC1Q8TDY2 1594 aa15.8■□□□□ 0.12
EPB42-201ENST00000300215 ACIN1Q9UKV3 1341 aaKnown RBP15.79■□□□□ 0.12
EPB42-201ENST00000300215 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
EPB42-201ENST00000300215 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
EPB42-201ENST00000300215 NACADO15069 1562 aa15.76■□□□□ 0.11
EPB42-201ENST00000300215 SLC24A1O60721 1099 aa15.76■□□□□ 0.11
EPB42-201ENST00000300215 DCAF1Q9Y4B6 1507 aa15.76■□□□□ 0.11
EPB42-201ENST00000300215 ARID3CA6NKF2 412 aa15.76■□□□□ 0.11
EPB42-201ENST00000300215 CANXP27824 592 aaKnown RBP15.76■□□□□ 0.11
EPB42-201ENST00000300215 FBLN2P98095 1184 aa15.74■□□□□ 0.11
EPB42-201ENST00000300215 NPM2Q86SE8 214 aaKnown RBP15.71■□□□□ 0.11
EPB42-201ENST00000300215 ANP32AP39687 249 aaKnown RBP15.67■□□□□ 0.1
EPB42-201ENST00000300215 FKBP8Q14318 412 aa15.63■□□□□ 0.09
EPB42-201ENST00000300215 EIF5BO60841 1220 aaKnown RBP15.61■□□□□ 0.09
EPB42-201ENST00000300215 NEFMP07197 916 aa15.61■□□□□ 0.09
EPB42-201ENST00000300215 ZNF777Q9ULD5 760 aaPredicted RBP15.59■□□□□ 0.09
EPB42-201ENST00000300215 HNRNPUQ00839 825 aaKnown RBP eCLIP15.56■□□□□ 0.08
EPB42-201ENST00000300215 SALL2Q9Y467 1007 aaPredicted RBP15.55■□□□□ 0.08
EPB42-201ENST00000300215 DDX10Q13206 875 aaKnown RBP15.55■□□□□ 0.08
EPB42-201ENST00000300215 MROH2BQ7Z745 1585 aa15.54■□□□□ 0.08
EPB42-201ENST00000300215 FAM9BQ8IZU0 186 aa15.52■□□□□ 0.08
EPB42-201ENST00000300215 BAZ1AQ9NRL2 1556 aaPredicted RBP15.5■□□□□ 0.07
EPB42-201ENST00000300215 HSP90AA1P07900 732 aaKnown RBP15.48■□□□□ 0.07
EPB42-201ENST00000300215 WRNQ14191 1432 aaPredicted RBP eCLIP15.47■□□□□ 0.07
EPB42-201ENST00000300215 BAZ1BQ9UIG0 1483 aaKnown RBP15.47■□□□□ 0.07
EPB42-201ENST00000300215 TONSLQ96HA7 1378 aa15.45■□□□□ 0.06
EPB42-201ENST00000300215 CHGAP10645 457 aaKnown RBP15.43■□□□□ 0.06
EPB42-201ENST00000300215 CLIP1P30622 1438 aa15.42■□□□□ 0.06
EPB42-201ENST00000300215 NBR1Q14596 966 aa15.41■□□□□ 0.06
EPB42-201ENST00000300215 CEP162Q5TB80 1403 aa15.41■□□□□ 0.06
EPB42-201ENST00000300215 ANP32BQ92688 251 aaKnown RBP15.4■□□□□ 0.06
EPB42-201ENST00000300215 ARXQ96QS3 562 aa15.4■□□□□ 0.06
EPB42-201ENST00000300215 CCDC136Q96JN2 1154 aa15.39■□□□□ 0.06
EPB42-201ENST00000300215 UPF2Q9HAU5 1272 aaKnown RBP15.38■□□□□ 0.05
EPB42-201ENST00000300215 SOGA1O94964 1423 aa15.37■□□□□ 0.05
EPB42-201ENST00000300215 TMC1Q8TDI8 760 aa15.36■□□□□ 0.05
EPB42-201ENST00000300215 IRX6P78412 446 aaPredicted RBP15.36■□□□□ 0.05
EPB42-201ENST00000300215 CHIC2Q9UKJ5 165 aa15.36■□□□□ 0.05
EPB42-201ENST00000300215 HIRIP3Q9BW71 556 aaPredicted RBP15.35■□□□□ 0.05
EPB42-201ENST00000300215 CCDC88BA6NC98 1476 aa15.35■□□□□ 0.05
EPB42-201ENST00000300215 GOLGA3Q08378 1498 aa15.33■□□□□ 0.04
EPB42-201ENST00000300215 WIZO95785 1651 aa15.32■□□□□ 0.04
EPB42-201ENST00000300215 EEA1Q15075 1411 aa15.32■□□□□ 0.04
EPB42-201ENST00000300215 ABCC8Q09428 1581 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms