Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 MTHFR-217ENST00000641820 1569 ntBASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 AC253536.4-201ENST00000440539 267 ntBASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 RN7SL574P-201ENST00000581512 297 ntBASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 AC026740.1-201ENST00000607068 791 ntBASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CNKSR3Q6P9H4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 CLUHP2-201ENST00000426660 1303 ntBASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 NUP210P1-202ENST00000504322 710 ntBASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 BNIP3P13-201ENST00000599968 566 ntBASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 U62317.3-201ENST00000608319 855 ntBASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 AC079336.7-201ENST00000623428 1078 ntBASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 AC055811.4-201ENST00000624039 1754 ntBASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.54■□□□□ 0.24
CNKSR3Q6P9H4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms