Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CBX5P45973 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CBX5P45973 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.56□□□□□ -0.24
CBX5P45973 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CBX5P45973 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CBX5P45973 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.56□□□□□ -0.24
CBX5P45973 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.55□□□□□ -0.24
CBX5P45973 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.55□□□□□ -0.24
CBX5P45973 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.55□□□□□ -0.24
CBX5P45973 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.55□□□□□ -0.24
CBX5P45973 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.55□□□□□ -0.24
CBX5P45973 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.55□□□□□ -0.24
CBX5P45973 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.55□□□□□ -0.24
CBX5P45973 REXO1L6P-202ENST00000619970 1078 ntBASIC13.55□□□□□ -0.24
CBX5P45973 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.55□□□□□ -0.24
CBX5P45973 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.55□□□□□ -0.24
CBX5P45973 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.55□□□□□ -0.24
CBX5P45973 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CBX5P45973 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CBX5P45973 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
CBX5P45973 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
CBX5P45973 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 AC013726.1-201ENST00000563747 2285 ntBASIC13.55□□□□□ -0.24
CBX5P45973 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CBX5P45973 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.55□□□□□ -0.24
CBX5P45973 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
CBX5P45973 Z82170.1-201ENST00000625081 3192 ntBASIC13.55□□□□□ -0.24
CBX5P45973 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.54□□□□□ -0.24
CBX5P45973 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CBX5P45973 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CBX5P45973 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CBX5P45973 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 AC027601.5-201ENST00000624065 2482 ntBASIC13.54□□□□□ -0.24
CBX5P45973 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.54□□□□□ -0.24
CBX5P45973 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CBX5P45973 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 CXCL1P1-201ENST00000502804 216 ntBASIC13.54□□□□□ -0.24
CBX5P45973 LINC01711-201ENST00000598340 967 ntBASIC13.54□□□□□ -0.24
CBX5P45973 AC005593.1-201ENST00000624894 515 ntBASIC13.54□□□□□ -0.24
CBX5P45973 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CBX5P45973 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.54□□□□□ -0.24
CBX5P45973 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 AC092127.1-201ENST00000567093 3455 ntBASIC13.54□□□□□ -0.24
CBX5P45973 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 KRT8P44-201ENST00000441609 1350 ntBASIC13.54□□□□□ -0.24
CBX5P45973 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CBX5P45973 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.54□□□□□ -0.24
CBX5P45973 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms