Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.07□□□□□ -0.48
RAB4AP20338 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB4AP20338 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.07□□□□□ -0.48
RAB4AP20338 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.07□□□□□ -0.48
RAB4AP20338 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
RAB4AP20338 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB4AP20338 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB4AP20338 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.07□□□□□ -0.48
RAB4AP20338 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.07□□□□□ -0.48
RAB4AP20338 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.07□□□□□ -0.48
RAB4AP20338 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
RAB4AP20338 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
RAB4AP20338 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
RAB4AP20338 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.06□□□□□ -0.48
RAB4AP20338 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 PCGF3-213ENST00000620529 1899 ntBASIC12.06□□□□□ -0.48
RAB4AP20338 AL591122.2-201ENST00000624125 1853 ntBASIC12.06□□□□□ -0.48
RAB4AP20338 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB4AP20338 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB4AP20338 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 KRT8P39-201ENST00000396270 1433 ntBASIC12.06□□□□□ -0.48
RAB4AP20338 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 AC092117.1-201ENST00000621230 3250 ntBASIC12.06□□□□□ -0.48
RAB4AP20338 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RAB4AP20338 AL845331.1-201ENST00000424978 1190 ntBASIC12.06□□□□□ -0.48
RAB4AP20338 LIN28AP1-201ENST00000429574 405 ntBASIC12.06□□□□□ -0.48
RAB4AP20338 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.06□□□□□ -0.48
RAB4AP20338 AL592071.1-201ENST00000611956 408 ntBASIC12.06□□□□□ -0.48
RAB4AP20338 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RAB4AP20338 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
RAB4AP20338 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
RAB4AP20338 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB4AP20338 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB4AP20338 AL357140.3-201ENST00000639753 1983 ntBASIC12.06□□□□□ -0.48
RAB4AP20338 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.06□□□□□ -0.48
RAB4AP20338 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
RAB4AP20338 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.06□□□□□ -0.48
RAB4AP20338 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB4AP20338 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.06□□□□□ -0.48
RAB4AP20338 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.06□□□□□ -0.48
RAB4AP20338 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
RAB4AP20338 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.06□□□□□ -0.48
RAB4AP20338 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB4AP20338 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 AC243591.1-201ENST00000452967 1364 ntBASIC12.05□□□□□ -0.48
RAB4AP20338 LINC01230-201ENST00000625222 3017 ntBASIC12.05□□□□□ -0.48
RAB4AP20338 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.05□□□□□ -0.48
RAB4AP20338 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
RAB4AP20338 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.05□□□□□ -0.48
RAB4AP20338 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB4AP20338 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB4AP20338 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB4AP20338 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms