Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SMAD6O43541 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SMAD6O43541 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.7■□□□□ 0.1
SMAD6O43541 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.7■□□□□ 0.1
SMAD6O43541 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.7■□□□□ 0.1
SMAD6O43541 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SMAD6O43541 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SMAD6O43541 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SMAD6O43541 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.69■□□□□ 0.1
SMAD6O43541 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.69■□□□□ 0.1
SMAD6O43541 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.69■□□□□ 0.1
SMAD6O43541 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.69■□□□□ 0.1
SMAD6O43541 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.69■□□□□ 0.1
SMAD6O43541 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SMAD6O43541 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
SMAD6O43541 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.69■□□□□ 0.1
SMAD6O43541 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.69■□□□□ 0.1
SMAD6O43541 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.69■□□□□ 0.1
SMAD6O43541 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SMAD6O43541 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SMAD6O43541 BTNL10-201ENST00000595971 695 ntBASIC15.69■□□□□ 0.1
SMAD6O43541 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.69■□□□□ 0.1
SMAD6O43541 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.69■□□□□ 0.1
SMAD6O43541 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 AC136621.1-201ENST00000624017 2304 ntBASIC15.69■□□□□ 0.1
SMAD6O43541 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.69■□□□□ 0.1
SMAD6O43541 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMAD6O43541 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.68■□□□□ 0.1
SMAD6O43541 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.68■□□□□ 0.1
SMAD6O43541 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SMAD6O43541 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
SMAD6O43541 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SMAD6O43541 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.68■□□□□ 0.1
SMAD6O43541 AC018665.1-201ENST00000622927 1362 ntBASIC15.68■□□□□ 0.1
SMAD6O43541 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SMAD6O43541 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 ARSEP1-201ENST00000420443 635 ntBASIC15.68■□□□□ 0.1
SMAD6O43541 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.68■□□□□ 0.1
SMAD6O43541 CROCCP4-201ENST00000457096 498 ntBASIC15.68■□□□□ 0.1
SMAD6O43541 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.68■□□□□ 0.1
SMAD6O43541 AP001063.1-201ENST00000568332 529 ntBASIC15.68■□□□□ 0.1
SMAD6O43541 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.68■□□□□ 0.1
SMAD6O43541 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.68■□□□□ 0.1
SMAD6O43541 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SMAD6O43541 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.68■□□□□ 0.1
SMAD6O43541 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.68■□□□□ 0.1
SMAD6O43541 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.68■□□□□ 0.1
SMAD6O43541 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SMAD6O43541 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms