Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 SPDYE12P-201ENST00000618416 771 ntBASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAF4Q9BUZ4 AC073439.1-201ENST00000624121 1774 ntBASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 MROH4P-201ENST00000431302 1578 ntBASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 FAM220BP-201ENST00000377689 816 ntBASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 SPTSSB-204ENST00000617024 1292 ntBASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 AL590560.3-201ENST00000623350 461 ntBASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 AL035456.1-201ENST00000456064 1369 ntBASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 KRT8P39-201ENST00000396270 1433 ntBASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 AL671710.1-201ENST00000610245 2349 ntBASIC14.06□□□□□ -0.16
TRAF4Q9BUZ4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 GGT3P-204ENST00000453783 1664 ntBASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 AL353705.2-201ENST00000428243 662 ntBASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 HLA-V-204ENST00000476601 1289 ntBASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms