Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 AC018529.2-202ENST00000611482 3087 ntBASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.57■□□□□ 0.08
CKAP2Q8WWK9 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 MIR3652-201ENST00000579335 131 ntBASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 AC024267.1-201ENST00000582320 895 ntBASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 CLEC4GP1-201ENST00000596555 870 ntBASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 OR2I1P-209ENST00000641730 5365 ntBASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CKAP2Q8WWK9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 AP000845.1-201ENST00000581677 2131 ntBASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 PRSS29P-201ENST00000440800 595 ntBASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 AC105339.3-201ENST00000560043 636 ntBASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms