Protein–RNA interactions for Protein: Q8TDG2

ACTRT1, Actin-related protein T1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT1Q8TDG2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 AL450487.1-201ENST00000426799 995 ntBASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 RPL13AP23-201ENST00000480739 586 ntBASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 AC068587.6-202ENST00000641839 5619 ntBASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ACTRT1Q8TDG2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 FO393414.2-201ENST00000405153 598 ntBASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 AC079140.1-201ENST00000508039 487 ntBASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 AC026120.1-201ENST00000611536 926 ntBASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
ACTRT1Q8TDG2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
ACTRT1Q8TDG2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.27■□□□□ 0.19
ACTRT1Q8TDG2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
ACTRT1Q8TDG2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ACTRT1Q8TDG2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
ACTRT1Q8TDG2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.27■□□□□ 0.19
ACTRT1Q8TDG2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 MTHFR-210ENST00000641407 2387 ntBASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 HIST3H2BA-201ENST00000436555 524 ntBASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 SPDYE11-202ENST00000450699 704 ntBASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.26■□□□□ 0.19
ACTRT1Q8TDG2 KRT8P48-201ENST00000515599 1220 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms