Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TOP1P11387 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
TOP1P11387 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.37■□□□□ 0.53
TOP1P11387 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.37■□□□□ 0.53
TOP1P11387 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TOP1P11387 KRT18P43-201ENST00000469825 1281 ntBASIC18.37■□□□□ 0.53
TOP1P11387 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.37■□□□□ 0.53
TOP1P11387 FAM86LP-201ENST00000478302 853 ntBASIC18.37■□□□□ 0.53
TOP1P11387 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.37■□□□□ 0.53
TOP1P11387 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.37■□□□□ 0.53
TOP1P11387 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.37■□□□□ 0.53
TOP1P11387 AC092552.1-201ENST00000547243 906 ntBASIC18.37■□□□□ 0.53
TOP1P11387 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.37■□□□□ 0.53
TOP1P11387 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TOP1P11387 AL121723.1-201ENST00000445194 1519 ntBASIC18.37■□□□□ 0.53
TOP1P11387 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TOP1P11387 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TOP1P11387 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.37■□□□□ 0.53
TOP1P11387 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.36■□□□□ 0.53
TOP1P11387 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TOP1P11387 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TOP1P11387 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.36■□□□□ 0.53
TOP1P11387 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.36■□□□□ 0.53
TOP1P11387 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TOP1P11387 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.36■□□□□ 0.53
TOP1P11387 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.36■□□□□ 0.53
TOP1P11387 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.36■□□□□ 0.53
TOP1P11387 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.36■□□□□ 0.53
TOP1P11387 AC000095.1-201ENST00000603208 874 ntBASIC18.36■□□□□ 0.53
TOP1P11387 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TOP1P11387 AC063926.2-201ENST00000623766 1308 ntBASIC18.36■□□□□ 0.53
TOP1P11387 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TOP1P11387 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TOP1P11387 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TOP1P11387 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.35■□□□□ 0.53
TOP1P11387 AC126177.1-201ENST00000547829 2218 ntBASIC18.35■□□□□ 0.53
TOP1P11387 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TOP1P11387 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.35■□□□□ 0.53
TOP1P11387 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TOP1P11387 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.35■□□□□ 0.53
TOP1P11387 AC144831.1-201ENST00000573312 2656 ntBASIC18.35■□□□□ 0.53
TOP1P11387 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.35■□□□□ 0.53
TOP1P11387 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.35■□□□□ 0.53
TOP1P11387 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.35■□□□□ 0.53
TOP1P11387 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.35■□□□□ 0.53
TOP1P11387 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.35■□□□□ 0.53
TOP1P11387 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.35■□□□□ 0.53
TOP1P11387 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.35■□□□□ 0.53
TOP1P11387 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.35■□□□□ 0.53
TOP1P11387 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.35■□□□□ 0.53
TOP1P11387 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
TOP1P11387 NORAD-201ENST00000565493 5339 ntBASIC18.35■□□□□ 0.53
TOP1P11387 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.35■□□□□ 0.53
TOP1P11387 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms