Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 MRPL20P1-201ENST00000400819 433 ntBASIC11.74□□□□□ -0.53
SMIM17P0DL12 PMS2P4-201ENST00000412466 1052 ntBASIC11.74□□□□□ -0.53
SMIM17P0DL12 ATP6V0CP3-201ENST00000417255 467 ntBASIC11.74□□□□□ -0.53
SMIM17P0DL12 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 FGFR3P6-201ENST00000457012 610 ntBASIC11.74□□□□□ -0.53
SMIM17P0DL12 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 AL031055.1-201ENST00000606362 631 ntBASIC11.74□□□□□ -0.53
SMIM17P0DL12 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.74□□□□□ -0.53
SMIM17P0DL12 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM17P0DL12 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM17P0DL12 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM17P0DL12 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 AC245100.5-201ENST00000452108 331 ntBASIC11.73□□□□□ -0.53
SMIM17P0DL12 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 AC091304.2-201ENST00000564639 760 ntBASIC11.73□□□□□ -0.53
SMIM17P0DL12 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC11.73□□□□□ -0.53
SMIM17P0DL12 MIR4515-201ENST00000584082 81 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms