Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
RFPL1O75677 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RFPL1O75677 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.73■□□□□ 0.11
RFPL1O75677 MIR346-201ENST00000362234 95 ntBASIC15.73■□□□□ 0.11
RFPL1O75677 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.73■□□□□ 0.11
RFPL1O75677 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.73■□□□□ 0.11
RFPL1O75677 MIR943-201ENST00000401286 94 ntBASIC15.73■□□□□ 0.11
RFPL1O75677 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.73■□□□□ 0.11
RFPL1O75677 AC055876.3-201ENST00000431496 288 ntBASIC15.73■□□□□ 0.11
RFPL1O75677 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.73■□□□□ 0.11
RFPL1O75677 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.73■□□□□ 0.11
RFPL1O75677 KLF2P3-201ENST00000451977 1087 ntBASIC15.73■□□□□ 0.11
RFPL1O75677 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.73■□□□□ 0.11
RFPL1O75677 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.73■□□□□ 0.11
RFPL1O75677 IGHV3-62-201ENST00000520057 340 ntBASIC15.73■□□□□ 0.11
RFPL1O75677 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.73■□□□□ 0.11
RFPL1O75677 AC051619.7-201ENST00000568314 623 ntBASIC15.73■□□□□ 0.11
RFPL1O75677 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 AC138649.4-201ENST00000612222 287 ntBASIC15.73■□□□□ 0.11
RFPL1O75677 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.73■□□□□ 0.11
RFPL1O75677 MROH4P-201ENST00000431302 1578 ntBASIC15.73■□□□□ 0.11
RFPL1O75677 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RFPL1O75677 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RFPL1O75677 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RFPL1O75677 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.73■□□□□ 0.11
RFPL1O75677 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.73■□□□□ 0.11
RFPL1O75677 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.73■□□□□ 0.11
RFPL1O75677 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFPL1O75677 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.72■□□□□ 0.11
RFPL1O75677 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFPL1O75677 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.72■□□□□ 0.11
RFPL1O75677 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.72■□□□□ 0.11
RFPL1O75677 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.72■□□□□ 0.11
RFPL1O75677 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFPL1O75677 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
RFPL1O75677 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFPL1O75677 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFPL1O75677 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFPL1O75677 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
RFPL1O75677 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFPL1O75677 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFPL1O75677 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFPL1O75677 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RFPL1O75677 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFPL1O75677 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.72■□□□□ 0.11
RFPL1O75677 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.72■□□□□ 0.11
RFPL1O75677 AL139010.1-201ENST00000454878 894 ntBASIC15.72■□□□□ 0.11
RFPL1O75677 AC125807.1-201ENST00000483097 614 ntBASIC15.72■□□□□ 0.11
RFPL1O75677 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.72■□□□□ 0.11
RFPL1O75677 AC243562.1-201ENST00000560672 389 ntBASIC15.72■□□□□ 0.11
RFPL1O75677 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.72■□□□□ 0.11
RFPL1O75677 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFPL1O75677 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFPL1O75677 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFPL1O75677 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFPL1O75677 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.72■□□□□ 0.11
RFPL1O75677 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.72■□□□□ 0.11
RFPL1O75677 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RFPL1O75677 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.72■□□□□ 0.11
RFPL1O75677 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.71■□□□□ 0.11
RFPL1O75677 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.71■□□□□ 0.11
RFPL1O75677 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RFPL1O75677 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RFPL1O75677 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.71■□□□□ 0.11
RFPL1O75677 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RFPL1O75677 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.71■□□□□ 0.11
RFPL1O75677 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.71■□□□□ 0.11
RFPL1O75677 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RFPL1O75677 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
RFPL1O75677 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RFPL1O75677 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.71■□□□□ 0.11
RFPL1O75677 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.71■□□□□ 0.11
RFPL1O75677 AC107890.1-201ENST00000422478 521 ntBASIC15.71■□□□□ 0.11
RFPL1O75677 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.71■□□□□ 0.11
RFPL1O75677 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.71■□□□□ 0.11
RFPL1O75677 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.71■□□□□ 0.11
RFPL1O75677 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RFPL1O75677 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms