Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.06□□□□□ -0.16
POLR1DQ9Y2S0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.06□□□□□ -0.16
POLR1DQ9Y2S0 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR1DQ9Y2S0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
POLR1DQ9Y2S0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR1DQ9Y2S0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR1DQ9Y2S0 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR1DQ9Y2S0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
POLR1DQ9Y2S0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR1DQ9Y2S0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.06□□□□□ -0.16
POLR1DQ9Y2S0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
POLR1DQ9Y2S0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 SSR4P1-203ENST00000599569 2260 ntBASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 AC004461.1-201ENST00000412461 403 ntBASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 AC104640.1-201ENST00000562617 2109 ntBASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 AC126177.1-201ENST00000547829 2218 ntBASIC14.05□□□□□ -0.16
POLR1DQ9Y2S0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 TMBIM7P-203ENST00000641617 1718 ntBASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 AC211486.1-202ENST00000416371 468 ntBASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 RBPMS2P1-201ENST00000437762 623 ntBASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 AC211476.1-201ENST00000503899 468 ntBASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 MIR6080-201ENST00000617359 66 ntBASIC14.04□□□□□ -0.16
POLR1DQ9Y2S0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms