Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 AC068760.1-201ENST00000493579 1953 ntBASIC11.43□□□□□ -0.58
VAMP8Q9BV40 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.42□□□□□ -0.58
VAMP8Q9BV40 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 STX7-201ENST00000367937 1090 ntTSL 5 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 DUSP5P2-201ENST00000426873 1033 ntBASIC11.42□□□□□ -0.58
VAMP8Q9BV40 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 CR769767.2-201ENST00000622735 460 ntBASIC11.42□□□□□ -0.58
VAMP8Q9BV40 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VAMP8Q9BV40 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 HAUS4P1-201ENST00000406739 1145 ntBASIC11.41□□□□□ -0.58
VAMP8Q9BV40 TSPY12P-201ENST00000421279 868 ntBASIC11.41□□□□□ -0.58
VAMP8Q9BV40 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 SAPCD2P2-201ENST00000431719 1174 ntBASIC11.41□□□□□ -0.58
VAMP8Q9BV40 AC096631.2-201ENST00000436136 790 ntBASIC11.41□□□□□ -0.58
VAMP8Q9BV40 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 STK25P1-201ENST00000585406 838 ntBASIC11.41□□□□□ -0.58
VAMP8Q9BV40 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VAMP8Q9BV40 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 365.9 ms