Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 NPM1P43-201ENST00000558669 786 ntBASIC17.63■□□□□ 0.41
PTPN18Q99952 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.63■□□□□ 0.41
PTPN18Q99952 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.63■□□□□ 0.41
PTPN18Q99952 MIR4683-201ENST00000579659 81 ntBASIC17.63■□□□□ 0.41
PTPN18Q99952 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.63■□□□□ 0.41
PTPN18Q99952 AC012044.1-201ENST00000603431 297 ntBASIC17.63■□□□□ 0.41
PTPN18Q99952 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PTPN18Q99952 AC103691.2-201ENST00000618824 433 ntBASIC17.63■□□□□ 0.41
PTPN18Q99952 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.63■□□□□ 0.41
PTPN18Q99952 AC006453.1-201ENST00000636037 1257 ntBASIC17.63■□□□□ 0.41
PTPN18Q99952 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PTPN18Q99952 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PTPN18Q99952 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.63■□□□□ 0.41
PTPN18Q99952 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PTPN18Q99952 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PTPN18Q99952 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PTPN18Q99952 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
PTPN18Q99952 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PTPN18Q99952 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN18Q99952 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PTPN18Q99952 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN18Q99952 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN18Q99952 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PTPN18Q99952 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN18Q99952 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN18Q99952 AC011676.5-201ENST00000624864 2660 ntBASIC17.62■□□□□ 0.41
PTPN18Q99952 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN18Q99952 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN18Q99952 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN18Q99952 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
PTPN18Q99952 PUDPP3-201ENST00000445368 636 ntBASIC17.62■□□□□ 0.41
PTPN18Q99952 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN18Q99952 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PTPN18Q99952 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.62■□□□□ 0.41
PTPN18Q99952 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
PTPN18Q99952 RTN3P1-201ENST00000536295 711 ntBASIC17.62■□□□□ 0.41
PTPN18Q99952 AL160314.3-201ENST00000556041 767 ntBASIC17.62■□□□□ 0.41
PTPN18Q99952 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.62■□□□□ 0.41
PTPN18Q99952 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN18Q99952 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN18Q99952 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PTPN18Q99952 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN18Q99952 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PTPN18Q99952 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN18Q99952 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN18Q99952 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN18Q99952 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN18Q99952 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
PTPN18Q99952 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN18Q99952 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN18Q99952 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PTPN18Q99952 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN18Q99952 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN18Q99952 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN18Q99952 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN18Q99952 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN18Q99952 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN18Q99952 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN18Q99952 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN18Q99952 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN18Q99952 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN18Q99952 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PTPN18Q99952 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PTPN18Q99952 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PTPN18Q99952 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN18Q99952 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PTPN18Q99952 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPN18Q99952 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PTPN18Q99952 ISCA2P1-201ENST00000425548 448 ntBASIC17.61■□□□□ 0.41
PTPN18Q99952 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPN18Q99952 RN7SL181P-201ENST00000462921 277 ntBASIC17.61■□□□□ 0.41
PTPN18Q99952 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN18Q99952 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN18Q99952 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPN18Q99952 AC242376.1-201ENST00000559033 726 ntBASIC17.61■□□□□ 0.41
PTPN18Q99952 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN18Q99952 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN18Q99952 AC090164.2-201ENST00000611487 516 ntBASIC17.61■□□□□ 0.41
PTPN18Q99952 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN18Q99952 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN18Q99952 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN18Q99952 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTPN18Q99952 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN18Q99952 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN18Q99952 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTPN18Q99952 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN18Q99952 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN18Q99952 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN18Q99952 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN18Q99952 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PTPN18Q99952 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms