Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.21■□□□□ 0.19
IFT43Q96FT9 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
IFT43Q96FT9 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IFT43Q96FT9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
IFT43Q96FT9 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
IFT43Q96FT9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IFT43Q96FT9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.21■□□□□ 0.19
IFT43Q96FT9 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFT43Q96FT9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
IFT43Q96FT9 AP005117.1-202ENST00000581724 1908 ntBASIC16.21■□□□□ 0.19
IFT43Q96FT9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
IFT43Q96FT9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.21■□□□□ 0.18
IFT43Q96FT9 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
IFT43Q96FT9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
IFT43Q96FT9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
IFT43Q96FT9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.2■□□□□ 0.18
IFT43Q96FT9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
IFT43Q96FT9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 TSSK5P-201ENST00000423978 907 ntBASIC16.2■□□□□ 0.18
IFT43Q96FT9 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.2■□□□□ 0.18
IFT43Q96FT9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.2■□□□□ 0.18
IFT43Q96FT9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.2■□□□□ 0.18
IFT43Q96FT9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.2■□□□□ 0.18
IFT43Q96FT9 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.2■□□□□ 0.18
IFT43Q96FT9 RN7SL828P-201ENST00000607615 303 ntBASIC16.2■□□□□ 0.18
IFT43Q96FT9 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.2■□□□□ 0.18
IFT43Q96FT9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.2■□□□□ 0.18
IFT43Q96FT9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
IFT43Q96FT9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.2■□□□□ 0.18
IFT43Q96FT9 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT43Q96FT9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 KRT8P37-201ENST00000451609 1420 ntBASIC16.19■□□□□ 0.18
IFT43Q96FT9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.19■□□□□ 0.18
IFT43Q96FT9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 AL138828.2-201ENST00000615812 383 ntBASIC16.19■□□□□ 0.18
IFT43Q96FT9 SPDYE12P-201ENST00000618416 771 ntBASIC16.19■□□□□ 0.18
IFT43Q96FT9 AC023908.3-201ENST00000564211 3047 ntBASIC16.19■□□□□ 0.18
IFT43Q96FT9 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IFT43Q96FT9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
IFT43Q96FT9 AC063926.2-201ENST00000623766 1308 ntBASIC16.19■□□□□ 0.18
IFT43Q96FT9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 REXO1L1P-202ENST00000608646 1974 ntBASIC16.18■□□□□ 0.18
IFT43Q96FT9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms