Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.43□□□□□ -0.1
CDH11P55287 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CDH11P55287 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CDH11P55287 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CDH11P55287 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.43□□□□□ -0.1
CDH11P55287 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.43□□□□□ -0.1
CDH11P55287 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.43□□□□□ -0.1
CDH11P55287 HLA-J-203ENST00000494367 1087 ntBASIC14.43□□□□□ -0.1
CDH11P55287 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.43□□□□□ -0.1
CDH11P55287 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.43□□□□□ -0.1
CDH11P55287 AC109322.1-201ENST00000524499 1264 ntBASIC14.43□□□□□ -0.1
CDH11P55287 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 AC243562.1-201ENST00000560672 389 ntBASIC14.43□□□□□ -0.1
CDH11P55287 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.43□□□□□ -0.1
CDH11P55287 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CDH11P55287 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.43□□□□□ -0.1
CDH11P55287 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.43□□□□□ -0.1
CDH11P55287 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CDH11P55287 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.43□□□□□ -0.1
CDH11P55287 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.43□□□□□ -0.1
CDH11P55287 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.43□□□□□ -0.1
CDH11P55287 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH11P55287 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH11P55287 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH11P55287 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH11P55287 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH11P55287 WASH6P-202ENST00000359512 1437 ntBASIC14.42□□□□□ -0.1
CDH11P55287 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.42□□□□□ -0.1
CDH11P55287 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH11P55287 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH11P55287 AL589702.1-201ENST00000641229 1509 ntBASIC14.42□□□□□ -0.1
CDH11P55287 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH11P55287 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH11P55287 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CDH11P55287 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH11P55287 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH11P55287 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH11P55287 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.42□□□□□ -0.1
CDH11P55287 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CDH11P55287 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH11P55287 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.42□□□□□ -0.1
CDH11P55287 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
CDH11P55287 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CDH11P55287 AC093520.2-201ENST00000561830 333 ntBASIC14.42□□□□□ -0.1
CDH11P55287 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.42□□□□□ -0.1
CDH11P55287 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.42□□□□□ -0.1
CDH11P55287 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH11P55287 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH11P55287 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CDH11P55287 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.42□□□□□ -0.1
CDH11P55287 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.42□□□□□ -0.1
CDH11P55287 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH11P55287 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH11P55287 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.42□□□□□ -0.1
CDH11P55287 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH11P55287 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
CDH11P55287 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDH11P55287 LINC01101-201ENST00000622953 1884 ntBASIC14.42□□□□□ -0.1
CDH11P55287 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH11P55287 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CDH11P55287 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH11P55287 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH11P55287 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH11P55287 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH11P55287 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH11P55287 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH11P55287 UXT-AS1-201ENST00000590504 1525 ntBASIC14.41□□□□□ -0.1
CDH11P55287 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH11P55287 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH11P55287 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH11P55287 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDH11P55287 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH11P55287 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CDH11P55287 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH11P55287 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH11P55287 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH11P55287 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CDH11P55287 MIR770-201ENST00000390219 98 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms