Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
USP8P40818 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP8P40818 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP8P40818 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP8P40818 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP8P40818 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
USP8P40818 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.16■□□□□ 0.34
USP8P40818 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
USP8P40818 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
USP8P40818 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP8P40818 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP8P40818 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
USP8P40818 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.16■□□□□ 0.34
USP8P40818 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP8P40818 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.16■□□□□ 0.34
USP8P40818 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC17.15■□□□□ 0.34
USP8P40818 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.15■□□□□ 0.34
USP8P40818 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
USP8P40818 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.15■□□□□ 0.34
USP8P40818 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.15■□□□□ 0.34
USP8P40818 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.15■□□□□ 0.34
USP8P40818 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.15■□□□□ 0.34
USP8P40818 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.15■□□□□ 0.34
USP8P40818 AC023141.5-201ENST00000458585 616 ntBASIC17.15■□□□□ 0.34
USP8P40818 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.15■□□□□ 0.34
USP8P40818 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.15■□□□□ 0.34
USP8P40818 AC026150.2-201ENST00000564693 1156 ntBASIC17.15■□□□□ 0.34
USP8P40818 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.15■□□□□ 0.34
USP8P40818 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.15■□□□□ 0.34
USP8P40818 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
USP8P40818 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
USP8P40818 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC17.15■□□□□ 0.34
USP8P40818 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
USP8P40818 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
USP8P40818 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
USP8P40818 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP8P40818 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
USP8P40818 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
USP8P40818 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
USP8P40818 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.14■□□□□ 0.33
USP8P40818 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 GRK6P1-201ENST00000400595 1711 ntBASIC17.14■□□□□ 0.33
USP8P40818 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 GPS2P2-201ENST00000430745 888 ntBASIC17.14■□□□□ 0.33
USP8P40818 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.14■□□□□ 0.33
USP8P40818 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.14■□□□□ 0.33
USP8P40818 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.14■□□□□ 0.33
USP8P40818 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.14■□□□□ 0.33
USP8P40818 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.14■□□□□ 0.33
USP8P40818 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.14■□□□□ 0.33
USP8P40818 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.14■□□□□ 0.33
USP8P40818 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 MIR6080-201ENST00000617359 66 ntBASIC17.14■□□□□ 0.33
USP8P40818 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.14■□□□□ 0.33
USP8P40818 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.14■□□□□ 0.33
USP8P40818 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
USP8P40818 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
USP8P40818 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.14■□□□□ 0.33
USP8P40818 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP8P40818 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
USP8P40818 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
USP8P40818 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
USP8P40818 KRT8P37-201ENST00000451609 1420 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms