Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPB4C9JG80 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.82□□□□□ -0.2
NPIPB4C9JG80 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPB4C9JG80 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 AC055876.3-201ENST00000431496 288 ntBASIC13.81□□□□□ -0.2
NPIPB4C9JG80 MEIS3P1-201ENST00000495167 958 ntBASIC13.81□□□□□ -0.2
NPIPB4C9JG80 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 AC009407.1-201ENST00000568958 598 ntBASIC13.81□□□□□ -0.2
NPIPB4C9JG80 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 AC138649.4-201ENST00000612222 287 ntBASIC13.81□□□□□ -0.2
NPIPB4C9JG80 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 LINC00554-201ENST00000564841 3011 ntBASIC13.81□□□□□ -0.2
NPIPB4C9JG80 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms